5950 C/T *6226 C/G  6837 G/A  |
            5980 T/   6424 T/A *6920 C/T  |
            6059 T/C  6492 G/A *6954 T/C  |
            6080 A/C *6721 A/C *6955 C/T  |
                               *7102 G/T  |
                                          |------  SAF
                               *6626 G/A  |
                                7146 G/T  |
                                          |------  Ms475 & Ms7024 families
            5954 A/T  6697 T/C  7236 A/G  |
            5980  /C *6845 T/A  7243 A/G  |
           h6271 T/A *6913 A/T  7268 A/G  |
                      7228 A/G  7269 A/G  |
                      7234 A/G  7309 T/A  |
                                          |------- PA, PD
                               *6652 T/A  |
     TFnode1   ---------------------------|---?---  AC3063A, D2, D3
               |                          |
---------------------------------         | Conv:*{6845 A/T, 6913 T/A, 6920 T/C,
|         |         |           |         |        6938 C/T, 6954 C/T, 6955 T/C}
|*7268 +G |*6226 G/C| 3397 A/G  |         |
|         AC3949LR  | 3617 T/C  Musrsl1r  |---------| Conv:  *{6920 C/T, 6913 A/T}
AF081108  DAS       |*3622 A/G  AC5403LR  |         |
AF081110  DAO       |*4501 C/T  DAM       |         DAT
AF081114            |           AC5938A   |
                    AF081105              |--------------------
                    AF081104              | 3430 T/C          |
                                          |                   AF081112
                                          |                   AF081107
                                          |                   AC5938B
                                          |
                                          | TFnode2
                 Musmht---?------------------------------------
                              |           |                    | 6311 G/A
                              AF081106    |*7102 T/G           | 7125 T/C
                              AF081113    |----?-----DAD       |
                              DAA         | 6865 T/G           L1Orl
                              DAE         |*7268 +G            DAN
                              DAB         |--------- AF081111
                              DAR         |
                              DAQ         | 3526 C/A
                              DAP         | 5563 G/A
                              L1Md4       | 5827 C/T
                              AC4405lr    AF081109
                                          L1Spa

Notable homoplasies:

• Within TF radiation:

  • 6226 G/C found in a subset of TF1, and in L1Md4
  • 7268 +G found in a subset of TF1 but also in the L1Spa subset of TF2
  • 6226 C and 7268 +G both found in AF081114
  • 4501 C/T is also shared by AF081110 & AF081111

• Involving the TF stem

  • 6226 G/C is a reversion of the TF stem
  • 7102 reverts in L1Spa subgroup.
  • 6913, 6845, 6920, 6954, 6955 conversion unit reverts 5 substitutions in the TF stem
  • 6955 is a CG position set up high on the L1Md4 lineage

• Between TF and other lineages:

  • 6271 involved in several parallel substitutions and reversions
  • 6721 involved in several parallel substitutions and reversions
  • 6626 G/A occurs in parallel on the SA2 lineage
  • 6652 T/A is a reversion of a substitution above the A2/L1Md4 split
  • 3622 A/G occurs in parallel in L1MdA2
  • 5960 C/T occurs in parallel as a private substitution in L1MdA2

Last major revision: 5/10/99; last update: 7/15/99