Publications -S.C. Hardies

Selected Publications of S.C. Hardies

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Hardies SC, Wang L, Zhou L, Zhao Y, Casavant NC, and Huang S. 2000. LINE-1 (L1) lineages in the mouse. Mol. Biol. Evol. 17(4):616-628.
Greene-Till R, Zhao Y, and Hardies SC. 2000. Gene flow of unique sequences between Mus musculus domesticus and Mus spretus. Mamm. Genome 11:225-230.
Zhao, Y., Jacobs, C.P.D., Wang, L., and Hardies, S.C. MuERVC: a new family of murine retroviral-related repetitive sequences and its relationship to previously known families. Mammalian Genome 10: 477-481 (1999).
Zhao, Y., Greene-Till, R., and Hardies, S.C. Mus spretus LINE-1s in C57BL/6J map to at least two different chromosomes. Mamm. Genome 9: 679-680 (1998).
Zhao, Y., Daggett, L.P., and Hardies, S.C. Mus spretus LINE-1s in the Mus musculus domesticus inbred strain C57BL/6J are from two different Mus spretus LINE-1 subfamilies. Genetics 142:549-555 (1996).
Rikke, B.A., Zhao, Y., Daggett, L.P., Reyes, R. and Hardies, S.C. Mus spretus LINE-1 sequences detected in the Mus musculus inbred strain C57BL/6J using LINE-1 DNA probes. Genetics 139: 901-906 (1995).
Casavant, N.C. and Hardies, S.C. The dynamics of murine LINE-1 subfamily amplification. J. Mol. Biol. 241: 390-397 (1994)
Casavant, N.C. and Hardies, S.C. Shared sequence variants of Mus spretus LINE-1 elements tracing dispersal to within the last 1 Myr. Genetics: 137:565-572 (1994)
Casavant, N.C., and Hardies, S.C. Targeted cloning of a species- specific subfamily of LINE-1 elements by subfamily-specific-LINE-1-PCR. Mammalian Genome 4: 193-201 (1993).
Rikke, B.A., Pinto, L.H., Gorin, M.B., and Hardies, S.C. Mus spretus- specific LINE-1 DNA probes applied to cloning of the murine pearl locus, Genomics 15: 291-296 (1993)
Herman, G.E., Nadeau, J., and Hardies, S.C. The use of dispersed repetitive elements in the analysis of the mouse genome. Mammalian Genome 2: 207-214 (1992).
Rikke, B.A., and Hardies, S.C. LINE-1 repetitive DNA probes for species-specific cloning from Mus spretus and Mus domesticus genomes. Genomics 11, 895-904 (1991).
Rikke, B.A., Garvin, L.D., and Hardies, S.C. Systematic identification of species specificity in LINE-1 repetitive sequences between Mus domesticus and Mus spretus. J. Mol. Biol. 219, 635-643 (1991).
Garvin, L.D., and Hardies, S.C. Temporal and topological clustering of diverged residues among enterobacterial dihydrofolate reductases. Mol. Biol. and Evol. 8, 654-668 (1991)
Hardies, S.C., and Garvin, L.D. Can molecular evolution provide clues to the folding code? In "Conformations and Forces in Protein Folding", (Nall, B.T., and Dill, K.A., eds.), American Association for the Advancement of Science, Washington D.C., pp. 69-76, 1991.
Hardies, S.C. and B.A. Rikke. A selfish retrotransposition model for rodent LINE-1. In Molecular Evolution; UCLA Symposia on Molecular and Cellular Biology, New Series, (M. Clegg and S. O'Brien, Eds.) Vol 122, Alan R. Liss, Inc., New York, (1989) pp. 127-134.
Garvin, L.D. and S.C. Hardies, Nucleotide sequence for the htpR gene for Citrobacter freundii . Nucl. Acids Res. 17, 4889 (1989).
Hutchison III, C.A., S.C. Hardies, D.D. Loeb, W.R. Shehee, and M.H. Edgell. LINES and related retroposons: Long interspersed repeated sequences in the eukaryotic genome. In Mobile DNA. (Eds. Douglas E. Berg and Martha M. Howe) pp. 593-617, ASM, Washington D.C., 1989.
Casavant, N.C., Hardies, S.C., Funk, F.D., Comer, M.B., Edgell, M.H., and Hutchison, C.A. III Extensive movement of LINES ONE sequences in the Beta-globin loci of Mus caroli and Mus domesticus. Mol. Cell. Biol. 8, 4669-4674 (1988).
Edgell, M.H., Hardies, S.C., Loeb, D.D., Shehee, W.R., Padgett, R.W., Burton, F.H., Comer, M.B., Casavant, C., Funk, F.D., and Hutchison, C.A. III. The L1 Family in Mice. In Developmental control of Globin Gene Expression (Stamatoyannopoulos, G., and Nienhuis, A.W., eds.) Progress in Clinical and Biological Research, Vol. 251, pp. 107-129, Alan R. Liss, Inc., New York (1987).
Hardies, S.C. The Potential Use of Repetitive Sequences in Phylogenetic Reconstructions. The Wild Mouse in Immunology, (Potter, M., Nadeau, J.H., and Cancro, M.P., eds.) Current Topics in Microbiology and Immunology, Vol. 127, pp. 45-54, Springer-Verlag, New York (1986).
Hardies, S.C., Martin, S.L., Voliva, C.F., Hutchison, C.A. III, and Edgell, M.H. An analysis of replacement and synonymous changes in the rodent L1 repeat family. Mol. Biol. Evol. 3, 109-125 (1986).
Loeb, D.D., Padgett, R.W., Hardies, S.C., Shehee, W.R., Comer, M.B., Edgell, M.H., and Hutchison, C.A. III. The sequence of a large L1Md element reveals a tandemly repeated 5' end and several features found in retrotransposons. Mol. Cell. Biol. 6, 168-182 (1986).
Martin, S.L., Voliva, C.F., Hardies, S.C., Edgell, M.H., and Hutchison, C.A. III. Tempo and Mode of Concerted Evolution in the L1 Repeat Family of Mice. Mol. Biol. Evol. 2: 127-140 (1985).