Responding to request to display db = schgenomes and table = phageDfeav2
Coordinates referenced to phageDseq7-20-4
at phageDseq7-20-4.fasta
Content: 1 .. 163878
phageDfeav2 features
Index of phageDfeav2 features
Left Ter. Rpt. 1 .. 6941 + Terminal repeat
phageDorf277 15 .. 86 - omit
phageDorf192 117 .. 365 - putative orf
phageDorf193 458 .. 865 - 135 res.; series of helixes.
phageDorf194 958 .. 1341 - tripartite CC
phageDorf195 1417 .. 1680 - homologue of phageDorf202; LP65-160
phageDorf196 1738 .. 1947 - putative orf
phageDorf197 1948 .. 2190 - 80 res.; C term CC.
phageDorf303 2246 .. 2371 - homol. of SPO1 gp55 (host takeover)
phageDorf198 2368 .. 2532 - 54 res., 2 hydrophobic helixes, one diagnosed as TM helix
phageDorf199 2587 .. 2874 - putative orf
phageDorf200 2937 .. 3044 - homologue of SP01 gp58
phageDorf201 3101 .. 3478 - homologue of gp95 [Mycobacteriophage Bxz1]
phageDorf202 3535 .. 3828 - ? homol of YP_53001 [vibriophage VP2]; LP65-160
phageDorf203 3915 .. 4292 - putative orf
phageDorf204 4352 .. 4549 - putative orf
phageDorf205 4613 .. 4840 - putative orf
phageDorf206 4993 .. 5400 - putative orf
phageDorf207 5397 .. 5570 - putative orf
phageDorf208 5557 .. 5784 - putative orf
phageDorf209 5784 .. 5912 - putative orf
phageDorf210 5909 .. 6160 - putative orf
phageDorf211 6371 .. 6406 - omit
phageDorf212 6433 .. 6618 - 61 res.; composed of two transmembrane helixes.
phageDorf213 7004 .. 7360 - putative orf
phageDorf214 7263 .. 7604 - homologue of SPP1 gp29.1
phageDorf215 7610 .. 7957 - B. thur. homol.
phageDorf216 7962 .. 8147 - putative orf
phageDorf217 8159 .. 8371 - putative orf
phageDorf218 8374 .. 8802 - putative orf
phageDorf219 8811 .. 9047 - putative orf
phageDorf220 9184 .. 9480 - putative orf
phageDorf221 9508 .. 9795 - putative orf
phageDorf222 9809 .. 10060 - homologue of SP01 gp46?
phageDorf223 10134 .. 10331 - putative orf
phageDorf224 10405 .. 10686 - homologue to SPBc2 yopY
phageDorf225 10706 .. 11092 - homologue of phBC6A51 BC1876?
phageDorf226 11105 .. 11245 - putative orf
phageDorf227 11334 .. 11540 - putative orf
phageDorf228 11540 .. 11743 - putative orf
phageDorf229 11818 .. 12015 - putative orf
phageDorf230 12042 .. 12287 - cro/CI family member.
phageDorf231 12389 .. 12670 - putative orf
phageDorf232 12747 .. 12986 - putative orf
phageDorf233 13050 .. 13409 - putative orf
phageDorf234 13422 .. 13598 - putative orf
phageDorf235 13677 .. 14144 - putative orf
phageDorf236 14224 .. 14613 - putative orf
phageDorf237 14600 .. 14935 - putative orf
phageDorf238 14928 .. 15839 - putative orf
phageDorf239 15957 .. 16190 - putative orf
phageDorf240 16296 .. 16658 - putative orf
phageDorf241 16737 .. 16856 - putative orf
phageDorf242 17092 .. 17268 - putative orf
phageDorf243 17432 .. 17545 - putative orf
phageDorf244 17582 .. 17872 - putative orf
phageDorf245 17918 .. 18319 - holin?; SPO1; twort-101
phageDorf246 18363 .. 18536 - putative orf
phageDorf247 18580 .. 18753 - putative orf
phageDorf248 18743 .. 19354 - putative orf
phageDorf249 19351 .. 19929 - unidentified family
phageDorf250 19969 .. 20313 - putative orf
phageDorf251 20332 .. 20757 - unidentified family
phageDorf252 20771 .. 21112 - putative orf
phageDorf253 21105 .. 21632 - putative orf; STR.
phageDorf254 21638 .. 21856 - putative orf
phageDorf255 21856 .. 22056 - putative orf
phageDorf256 22073 .. 22375 - putative orf
phageDorf257 22372 .. 22437 - putative orf
phageDorf258 22465 .. 22659 - putative orf
phageDorf259 22773 .. 22910 - putative orf
phageDorf260 22932 .. 23210 - putative orf
phageDorf261 23238 .. 23471 - Cro/CI family member.
phageDorf262 23485 .. 23730 - putative orf
phageDorf263 23810 .. 24103 - putative orf
phageDorf264 24122 .. 24406 - putative orf
phageDorf265 24399 .. 24593 - putative orf
phageDorf266 24590 .. 25033 - putative orf
phageDorf267 25021 .. 25266 - putative orf
phageDorf268 25239 .. 25712 - homol. SPBc2 yopX; Lp1-30; LP65-15
phageDorf269 25712 .. 25855 - putative orf
phageDorf270 25842 .. 26012 - putative orf
phageDorf271 26012 .. 26374 - putative orf
phageDorf272 26391 .. 26600 - putative orf
phageDorf273 26540 .. 26656 + omit
phageDorf301 26620 .. 26883 - putative orf
phageDorf1 26671 .. 26883 - omit
phageDorf2 26864 .. 27076 - putative orf
phageDorf3 27184 .. 29415 - member of ftsK family
phageDorf4 29402 .. 29521 - tiny putative orf
phageDorf5 29540 .. 31135 - Homol. pXorf203; virB6 candidate
phageDorf6 30664 .. 31221 - putative orf
phageDorf7 31166 .. 31369 - omit
phageDorf8 31448 .. 31960 + HNH nuclease family; SPO1.
phageDorf9 32040 .. 32201 + omit
phageDorf10 32134 .. 32694 - Homologous to a metallopeptidase domain.
phageDorf11 32821 .. 33132 - putative orf
phageDorf12 33113 .. 34192 - Family including an SPO1 member; rod shape determination protein ?
phageDorf13 34354 .. 35787 - levanase
phageDorf14 35859 .. 36077 - putative orf
phageDorf15 36096 .. 36476 - putative orf
phageDorf16 36469 .. 36903 - putative orf w weak PolA motif
phageDorf17 36900 .. 37022 - putative orf
phageDorf18 37022 .. 37216 - putative orf
phageDorf19 37233 .. 37400 - putative orf
phageDorf20 37363 .. 37794 - putative orf
phageDorf21 37811 .. 38047 - putative orf
phageDorf22 38055 .. 38249 - putative orf
phageDorf23 38246 .. 38362 - putative orf
phageDorf24 38391 .. 38654 - putative orf
phageDorf25 38665 .. 39870 - rtcB
phageDorf26 39912 .. 40799 - putative orf
phageDorf27 40792 .. 40890 - putative orf
phageDorf28 40996 .. 41214 - putative orf
phageDorf29 41225 .. 41638 - putative orf
phageDorf30 41656 .. 42648 - sigma factor
phageDorf31 42807 .. 43037 - putative orf
phageDorf32 43030 .. 43167 - trunc. homol. of phBC6A51 AAP08850?
phageDorf33 43169 .. 43393 - homol. of A118 gp55
phageDorf34 43386 .. 43592 - putative orf
phageDorf278 43593 .. 43643 - putative orf
phageDorf35 43630 .. 44535 - putative orf
phageDorf36 44528 .. 44995 - putative orf
phageDorf37 45009 .. 45743 - putative orf, SPO1 homologue?
phageDorf38 45887 .. 46258 - putative orf
phageDorf39 46279 .. 46530 - putative orf; SPO1 homologue
phageDorf40 46530 .. 46682 - putative orf
StaphK reg. 1 46687 ..128876 - StaphK homologous region 1.
phageDorf41 46688 .. 47266 - SK ORF105; G1-100; twort-88; P100-98
phageDorf42 47388 .. 47864 - SK ORF104; G1-94; twort-79;P100-97 STR.
phageDorf43 47885 .. 48625 - SK103l; LP65-41; SPO1; G1-45; twort-48; P100-96
phageDorf44 48924 .. 49238 - putative orf
phageDorf45 49231 .. 49686 - putative orf
phageDorf46 49722 .. 49925 - putative orf
phageDorf47 49938 .. 50807 - SK orf102.5; G1-36; twort-38; P100-86
phageDorf48 50797 .. 51099 - putative orf
Orf 48,49 indel 50807 .. 51631 - Two extra genes in phageD
phageDorf49 51101 .. 51631 - putative orf
phageDorf50 51631 .. 52161 - SK-ORF102; G1-99; twort-93; P100-85
phageDorf51 52274 .. 52822 - 182 res. putative orf w. C term CC
phageDorf52 52921 .. 53640 - cII family; SK101; LP65-45; G1-45; twort-43
phageDorf53 53714 .. 54313 - SK 100.5; G1-75; twort-71; LP65-46
phageDorf54 54318 .. 54674 - homol. of StaphK 100?
phageDorf55 54756 .. 55133 - homol. StaphK orf 99
phageDorf56 55148 .. 56458 - SK98; LP65-63; G1-22; twort-20
phageDorf57 56471 .. 56749 - putative orf
phageDorf58 56793 .. 57734 - partial homol. of StaphK orf97 ?
phageDorf59 57926 .. 58429 - SK ORF95; G1-59; twort-56; STR.
phageDorf60 58457 .. 58753 - holin
phageDorf61 58797 .. 59435 - Sigma fac.; SK ORF94; SPO1; G1-56; twort-58
phageDorf62 59419 .. 59778 - SK 93.5; G1-121; twort-112
phageDorf63 59819 .. 61015 - recA; SK 93;LP65-53; G1-21; twort-19
phageDorf64 61099 .. 62337 - homol. of StaphK orf92; twort-22
phageDorf65 62437 .. 62622 - putative orf
phageDorf66 62645 .. 63160 - homol. SK91; LP65-55; G1-89; twort-77
phageDorf67 63278 .. 66235 - ung/3' exo/DNA pol.; LP65-59;SK86-88-90; G1-37-35-19; twort-4
phageDorf68 66249 .. 66473 - homol. of StaphK orf85
phageDorf69 66556 .. 66846 - hu (StaphK orf85); G1-147; twort-129
phageDorf70 66833 .. 67615 - SK-ORF84; G1-66; twort-64
Subst. region 67703 .. 70477 - Subst. orf 71-79
phageDorf71 67704 .. 67916 - putative orf
phageDorf72 67913 .. 68161 - putative orf
phageDorf73 68158 .. 68550 - putative orf
phageDorf74 68547 .. 68771 - putative orf
phageDorf75 68768 .. 68956 - putative orf
phageDorf76 68965 .. 69156 - putative orf
phageDorf77 69172 .. 69945 - beta lactamase family III ?
phageDorf78 69942 .. 70139 - putative orf
phageDorf79 70241 .. 70477 - thioredoxin
B. sub. region 70476 .. 74486 - Region highly similar to SPBc2 nrd locus in B. subtilis genome
phageDorf80 70477 .. 71460 - rNDP red., beta; sK81; SPO1; G1-25; twort-25
phageDorf81 71453 .. 71629 - putative orf
phageDorf82 71616 .. 72002 - putative orf
phageDorf83 72027 .. 74126 - rNDP red., alpha; sK80; SPO1; G1-6; twort-33
phageDorf84 74107 .. 74484 - NrdI; sK79
phageDorf85 74653 .. 74952 - putative orf
phageDorf86 74965 .. 75519 - small family; SK78; LP65-62; SPO1; G1-64; twort-63
phageDorf87 75523 .. 75783 - SPP1orf5 family; SPO1; twort-146
phageDorf88 75783 .. 76166 - CC; homol of SK77
phageDorf89 76153 .. 76482 - putative orf
phageDorf90 76487 .. 77248 - dUTPase
phageDorf91 77322 .. 78413 - primase; sK76;LP65-68
phageDorf92 78418 .. 79011 - SK75; LP65-69; G1-67; twort-65
phageDorf93 79008 .. 80909 - rec.exo. subunit 2; sK74; LP65-70; SPO1; G1-9; twort-9
phageDorf94 81015 .. 82088 - rec. exo. subunit 1; sK72; LP65-75; SPO1; G1-28; twort-27
phageDorf95 82115 .. 83587 - replicative helicase; sK71; LP65-76; SPO1; G1-15; twort-14
phageDorf96 83652 .. 85352 - rep? or transcriptional regulator?; SK orf70; G1-13; twort-13
phageDorf97 85427 .. 85624 - putative orf
phageDorf98 85638 .. 87410 - rad25; sK69; LP65-123; SPO1; G1-12; twort-6
phageDorf99 87732 .. 88244 - host adhesion?; STR.
phageDorf100 88311 .. 88481 - homol. SK65.5; G1-262; twort-232; P100-gp38
phageDorf101 88496 .. 91996 - VrlC; sK65; lamJ?; LP65-90; SPO1; G1-2; twort-3; STR.
phageDorf102 92015 .. 92545 - baseplate T4 gp8; sK64; LP65-91; SPO1; G1-79; twort-83; STR.
phageDorf103 92666 .. 93865 - unknown function with CC N ter.: STR?
phageDorf104 93892 .. 95394 - bp assembly gpI/J N ter; sK63; LP65-94; SPO1; G1-3; twort-5: STR.
phageDorf105 95410 .. 96456 - bp assembly; Mu gp47;P2 gpJ; sK62; LP65-95; SPO1; G1-27; twort-26; STR.
phageDorf106 96470 .. 97207 - bp assembly P2_gpW/T4_gp25 family; Nter lyso.; sK61; LP65-132; SPO1; G1-52; twort-50; STR.
phageDorf107 97207 .. 97725 - homol. SK60; LP65-131; G1-78; twort-72, P100-gp32: STR.
phageDorf108 97722 .. 98474 - homol of SK59; LP65-orf129+130; SPO1; G1-43; twort-41: STR. T4 gp54?
phageDorf109 98527 .. 99006 - homol. of yaeF; lam K
phageDorf110 99063 .. 99671 - putative orf
phageDorf111 99685 .. 99894 - putative orf
phageDorf112 99906 ..102785 - tail protein family.
phageDorf113 102876 ..106586 - Lrg. protein with N ter domain like intimin and found in tail fibers.
phageDorf114 106603 ..108678 - homol. of staphK orf58; LP65-97; SPO1: STR.; P2gpV
phageDorf115 108689 ..110845 - T4 gp27 baseplate hub protein + lysozyme domain; sK56/57; LP65-135; SPO1; G1-5; twort-7: STR.
phageDorf116 110962 ..114765 - tape measure with C ter cell wall amidase; sK55; LP65-orf98; SPO1;G1-1; twort-2: STR.
phageDorf117 114827 ..115453 - 208 res. helical, CC bundle; homol. StaphK ORF54; A511 orf9.5; LP65-99; SPO1; G1-74; twort-81
A511 reg. 115240 ..126447 - Bacteriophage A511-related region
phageDorf118 115473 ..115889 - 138 res. helical bundle; homol. A511 ORF9; sK53; LP65-100; G-195; twort-229
phageDorf119 115973 ..116485 - putative orf
phageDorf120 116593 ..117186 - transglycosylase?; SPO1
phageDorf121 117370 ..117795 - tail tube?; A511 orf8; sK50; LP65-102; SPO1; G1-105; twort-106; STR
phageDorf122 117859 ..119568 - tail sheath protein; sK49; LP65-103; SPO1; G1-11; twort-11; STR.
phageDorf123 119593 ..119832 - homol. of A511 ORF7; SK 48.5; LP65-104; SPO1; G1-202; twort-185
phageDorf124 119838 ..120704 - homol. A511 ORF6; sK48; LP65-105; G1-39; twort-37: STR.; T4 gp15?
phageDorf125 120717 ..121349 - homol. A511 ORF5; sK47; LP65-106; G1-62; twort-55
phageDorf126 121349 ..122143 - homol. A511 ORF4; sK46; LP65-107; SPO1; G1-34; twort-34
phageDorf127 122157 ..123029 - homol. A511 ORF3; sK45; LP65-108; SPO1; G1-30; twort-32; STR.
phageDorf128 123061 ..123309 - homol. of sK 44.5 and A511 orf2.7
phageDorf129 123388 ..124833 - major capsid protein; sK44; LP65-109; SPO1; G1-16; twort-16; STR.
phageDorf130 124985 ..125911 - Scaffold; Homol. of Staph K ORF 43; A511 orf2l; LP65-110
phageDorf131 125904 ..126728 - prohead protease ;sK42; A511 orf1;LP65-111; SPO1; G1-48; twort-40
phageDorf132 126867 ..128519 - portal; sK41; LP65-112; SPO1; G1-14; twort-12; STR.
phageDorf133 128547 ..128876 - SK ORF40; G1-115; twort-121
phageDorf134 129233 ..129457 - omit
phageDorf135 129322 ..129531 - omit
tRNA-Asp 129376 ..129447 - tRNA-Asp
phageDorf136 129438 ..129728 - omit
phageDorf137 129935 ..130060 - omit
phageDorf138 130109 ..130231 - omit
phageDorf139 130434 ..130790 - putative orf
tRNA-Asn 130818 ..130889 - tRNA-Asn
phageDorf140 130905 ..131123 - omit
phageDorf141 131094 ..131234 + putative orf
phageDorf142 132134 ..132406 + transcriptional regulator; G1-187; twort-184
phageDorf143 132406 ..132606 + putative orf
phageDorf144 132608 ..132862 + putative orf
phageDorf145 132894 ..133130 - putative orf
phageDorf146 133156 ..133482 - putative orf; G1-209
phageDorf147 133501 ..133863 - putative orf; twort-158
phageDorf148 133844 ..134143 - putative orf
phageDorf149 134262 ..134525 + putative orf
phageDorf150 134553 ..135074 + putative orf
phageDorf151 135077 ..135370 + LP65-118; G1-161; twort-133
StaphK reg. 2 135353 ..139334 + Staphylococcus phage K homologous region 2.
phageDorf152 135354 ..135773 + SK orf34; G1-133; twort-192; LP65-117
phageDorf153 135773 ..137566 + large terminase; sK35; LP65-115; SPO1; G1-10; twort-36-59-151
phageDorf154 137654 ..138517 + SK ORF36; G1-40, twort-39
phageDorf155 138357 ..139334 + partial homol. of staphK orf37; twort57; G1
phageDorf156 139327 ..139650 + putative orf
phageDorf157 139707 ..140816 + lysin; SK30/32; twort15; G1
phageDorf279 140876 ..140980 + omit
phageDorf158 140922 ..141122 + putative orf
phageDorf159 141186 ..141884 + phoH; sK22; SPO1?; G1; twort
phageDorf160 141905 ..142510 + putative orf
phageDorf161 142582 ..143154 + unknown family
phageDorf162 143244 ..143450 + putative orf
phageDorf163 143515 ..144267 + nrdC.11 (pX 82, T4 rndC.11), nucleotidyl transferase
phageDorf164 144264 ..145211 + thymidylate synthase; SPO1
phageDorf165 145208 ..145798 + dNMP kinase, required for DNA syn, homol. T4 gp1, related to dephospo CoA kinase
orf419 145208 ..145986 + omit
phageDorf325 145777 ..145986 + gene fragment.
phageDorf166 146100 ..146606 + dihydrofolate reductase
phageDorf167 146608 ..147420 + unidentified family
phageDorf168 147462 ..147632 + putative orf
phageDorf169 147690 ..149453 + pectin lyase; homol. SPP1 gene 33; 2x SPO1; twort001; LP65-97
phiNIT1 REGION 147822 ..150250 + 3 gene recent transfer vs. phiNIT1
phageDorf170 149470 ..150093 + poly gamma glutamate hydrolase; SPO1; STR.
phageDorf171 150086 ..150235 + homol. of phiNITp3
phageDorf172 150344 ..150694 + putative orf
phageDorf173 150669 ..151010 + putative orf
phageDorf174 151000 ..151356 + putative orf
phageDorf175 151353 ..151622 + putative orf
phageDorf176 151627 ..152220 + putative orf; SPO1
phageDorf177 152213 ..152605 + putative orf
phageDorf178 152629 ..153033 + putative orf
phageDorf179 153046 ..153375 + putative orf
phageDorf180 153359 ..153541 + putative orf
phageDorf181 153593 ..154039 + 148 res. putative orf
phageDorf182 154032 ..154259 + 75 res.; putative orf; SPO1?
phageDorf183 154252 ..154650 + 132 res.; weak internal CC indication.
phageDorf184 154628 ..155149 + 173 res.; N ter. CC
phageDorf185 155156 ..155479 + 107 res.; N ter CC
phageDorf186 155452 ..155763 + homol. SPO1 early function; 103 res.
phageDorf187 155760 ..156044 + 94 res., C ter neg. charged, and maybe CC
phageDorf188 156022 ..156201 + homol. SPP1 orf3; 59 res., C ter pos. charged
phageDorf189 156198 ..156437 + 84 res., last 20 CC
phageDorf190 156477 ..156662 + 61 res. putative orf
phageDorf280 156765 ..157001 + omit
phageDorf191 156777 .. 64 + omit
R. Ter. repeat 156938 ..163878 + Right terminal repeat.
phageDorf281 157054 ..157302 - Repeat of pDacc192
phageDorf282 157395 ..157847 - Repeat of pDacc193
phageDorf283 157895 ..158353 - Repeat of pDacc194
phageDorf284 158354 ..158632 - Repeat pDacc195; LP65-160
phageDorf285 158675 ..158884 - Repeat of pDacc196
phageDorf286 158885 ..159193 - Repeat of pDacc197
phageDorf409 159183 ..159308 - Repeat of pDacc303
phageDorf287 159305 ..159484 - Repeat pDacc198
phageDorf288 159524 ..159943 - Repeat pDacc199
phageDorf289 160038 ..160493 - Repeat pDacc201
phageDorf290 160472 ..160792 - Repeat of pDacc202
phageDorf291 160852 ..161256 - Repeat of pDacc203
phageDorf292 161289 ..161486 - Repeat of pDacc204
phageDorf293 161550 ..161777 - Repeat of pDacc205
phageDorf294 161930 ..162337 - Repeat pDacc206
phageDorf295 162334 ..162600 - Repeat pDacc207
phageDorf296 162494 ..162736 - Repeat pDacc208
phageDorf297 162721 ..162930 - Repeat pDacc209
phageDorf298 162846 ..163100 - Repeat pDacc210
phageDorf299 163370 ..163753 - Repeat pDacc212
phageDorf300 163705 ..163878 - omit
Display summary of features
Retrieve segment of sequence
Responding to request to display db = schgenomes and table = phageDfeav2