Publication Listing for Yuzuru Shiio, MD/PhD

• Wnt Antagonist SFRP1 Functions as a Secreted Mediator of Senescence.
  Elzi DJ, Song M, Hakala K, Weintraub ST, Shiio Y
  Mol Cell Biol: 2012-11-01; 32(21); 4388-99     Epub: 2012-08-27.
  PMID: 22927647    LINK:
• Plasminogen activator inhibitor 1 - insulin-like growth factor binding protein 3 cascade regulates stress-induced senescence.
  Elzi DJ, Lai Y, Song M, Hakala K, Weintraub ST, Shiio Y
  Proc Natl Acad Sci U S A: 2012-07-24; 109(30); 12052-7     Epub: 2012-07-09.
  PMID: 22778398    LINK:
• The interaction of the von Hippel-Lindau tumor suppressor and heterochromatin protein 1.
  Lai Y, Song M, Hakala K, Weintraub ST, Shiio Y
  Arch Biochem Biophys: 2012-02-15; 518(2); 103-10     Epub: 2012-01-03.
  PMID: 22234250    LINK:
• Quantitative proteomic identification of the BRCA1 ubiquitination substrates.
  Song M, Hakala K, Weintraub ST, Shiio Y
  J Proteome Res: 2011-11-04; 10(11); 5191-8     Epub: 2011-10-11.
  PMID: 21950761    LINK:
• Proteomic dissection of the von Hippel-Lindau (VHL) interactome.
  Lai Y, Song M, Hakala K, Weintraub ST, Shiio Y
  J Proteome Res: 2011-11-04; 10(11); 5175-82     Epub: 2011-10-11.
  PMID: 21942715    LINK:
• Quantitative proteomics identifies the Myb-binding protein p160 as a novel target of the von Hippel-Lindau tumor suppressor.
  Lai Y, Qiao M, Song M, Weintraub ST, Shiio Y
  PLoS One: 2011-02-28; 6(2); e16975     Epub: 2011-02-28.
  PMID: 21386990    LINK:
• Quantitative proteome analysis using isotope-coded affinity tags and mass spectrometry.
  Shiio Y, Aebersold R
  Nat Protoc: 2008-06-27; 1(1); 139-45     Epub: 2008-06-27.
  PMID: 17406225    LINK:
• Quantitative proteomic analysis of myc-induced apoptosis: a direct role for Myc induction of the mitochondrial chloride ion channel, mtCLIC/CLIC4.
  Shiio Y, Suh KS, Lee H, Yuspa SH, Eisenman RN, Aebersold R
  J Biol Chem: 2006-02-03; 281(5); 2750-6     Epub: 2005-11-29.
  PMID: 16316993    LINK:
• Identification and characterization of SAP25, a novel component of the mSin3 corepressor complex.
  Shiio Y, Rose DW, Aur R, Donohoe S, Aebersold R, Eisenman RN
  Mol Cell Biol: 2006-02-01; 26(4); 1386-97
  PMID: 16449650    LINK:
• Myc antagonizes Ras-mediated growth arrest in leukemia cells through the inhibition of the Ras-ERK-p21Cip1 pathway.
  Vaqué JP, Navascues J, Shiio Y, Laiho M, Ajenjo N, Mauleon I, Matallanas D, Crespo P, León J
  J Biol Chem: 2005-01-14; 280(2); 1112-22     Epub: 2004-11-04.
  PMID: 15528212    LINK:
• Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry.
  Desiere F, Deutsch EW, Nesvizhskii AI, Mallick P, King NL, Eng JK, Aderem A, Boyle R, Brunner E, Donohoe S, Fausto N, Hafen E, Hood L, Katze MG, Kennedy KA, Kregenow F, Lee H, Lin B, Martin D, Ranish JA, Rawlings DJ, Samelson LE, Shiio Y, Watts JD, Wollsc
  Genome Biol: 2004-00-00; 6(1); R9     Epub: 2004-12-10.
  PMID: 15642101    LINK:
• Histone sumoylation is associated with transcriptional repression.
  Shiio Y, Eisenman RN
  Proc Natl Acad Sci U S A: 2003-11-11; 100(23); 13225-30     Epub: 2003-10-24.
  PMID: 14578449    LINK:
• Quantitative proteomic analysis of chromatin-associated factors.
  Shiio Y, Eisenman RN, Yi EC, Donohoe S, Goodlett DR, Aebersold R
  J Am Soc Mass Spectrom: 2003-07-01; 14(7); 696-703
  PMID: 12837591    LINK:
• Quantitative proteomic analysis of Myc oncoprotein function.
  Shiio Y, Donohoe S, Yi EC, Goodlett DR, Aebersold R, Eisenman RN
  EMBO J: 2002-10-01; 21(19); 5088-96
  PMID: 12356725    LINK:
• The Mad protein family links transcriptional repression to cell differentiation.
  McArthur, G. A., Laherty, C. D., Queva, C., Hurlin, P. J., Loo, L., James, L., Grandori, C., Gallant, P., Shiio, Y., Hokanson, W. C., Bush, A. C., Cheng, P. F., Lawrence, Q. A., Pulverer, B., Koskinen, P. J., Foley, K. P., Ayer, D. E., and Eisenman, R. N.
  Cold Spring Harb Symp Quant Biol: 1998-00-00; 63(); 423-33     Epub: 1998-00-00.
  PMID:    LINK:
• Retinoblastoma binding factor 1 site in the core promoter region of the human RB gene is activated by hGABP/E4TF1.
  Sowa, Y., Shiio, Y., Fujita, T., Matsumoto, T., Okuyama, Y., Kato, D., Inoue, J., Sawada, J., Goto, M., Watanabe, H., Handa, H., and Sakai, T.
  Cancer Res: 1997-00-00; 57(); 3145-8     Epub: 1997-00-00.
  PMID:    LINK:
• Myc and Max homologs in Drosophila.
  Gallant, P., Shiio, Y., Cheng, P. F., Parkhurst, S. M., and Eisenman, R. N.
  Science: 1996-00-00; 274(); 1523-7     Epub: 1996-00-00.
  PMID:    LINK:
• Activation of the retinoblastoma gene expression by Bcl-3: implication for muscle cell differentiation.
  Shiio, Y., Sawada, J., Handa, H., Yamamoto, T., and Inoue, J.
  Oncogene: 1996-00-00; 12(); 1837-45     Epub: 1996-00-00.
  PMID:    LINK:
• Epitope tagging.
  Shiio, Y., Itoh, M., and Inoue, J.
  Methods Enzymol: 1995-00-00; 254(); 497-502     Epub: 1995-00-00.
  PMID:    LINK:
• Identification of a DNA element that can enhance p53-mediated transactivation.
  Shiio, Y., Yamamoto, T., and Yamaguchi, N.
  Oncogene: 1993-00-00; 8(); 2059-65     Epub: 1993-00-00.
  PMID:    LINK:
• Negative regulation of Rb expression by the p53 gene product.
  Shiio, Y., Yamamoto, T., and Yamaguchi, N.
  Proc Natl Acad Sci U S A: 1992-00-00; 89(); 5206-10     Epub: 1992-00-00.
  PMID:    LINK: