RID=1110579719-10409-195869773208.BLASTQ2,

BLASTP 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
RID: 1110579719-10409-195869773208.BLASTQ2
Query= (213 letters)
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 2,355,158 sequences; 800,338,354 total letters
If you have any problems or questions with the results of this search
please refer to the BLAST FAQs
Results of PSI-Blast iteration 1 Taxonomy reports
Distribution of 14 Blast Hits on the Query Sequence


Legend:
 - means that the alignment score was below the threshold on the previous iteration 
 - means that the alignment was checked on the previous iteration 


Hit list size 
Sequences with E-value BETTER than threshold

                                                                     Score    E
Sequences producing significant alignments:                          (bits) Value


 gi|55819093|ref|YP_142568.1|  RAS family GTPase [Acanthomoeba pol...   126   3e-29 

 gi|131877|sp|P01117|RASK_MSVKI  Transforming protein p21 (K-Ras) ...    91   2e-18 

 gi|939930|emb|CAA80675.1|  proto-oncogene protein [Kirsten murine...    89   9e-18 

 gi|131872|sp|P23175|RASH_MSVNS  Transforming protein p21 >gi|6893...    84   2e-16 

 gi|131870|sp|P01113|RASH_MSV  Transforming protein p21 >gi|68930|...    83   4e-16 

 gi|131871|sp|P01115|RASH_MSVHA  Transforming protein p29 [Contain...    83   6e-16 

 gi|61559|emb|CAA25322.1|  transforming protein p21 [Murine sarcom...    83   6e-16 

 gi|332189|gb|AAA46570.1|  p21 v-has transforming protein                82   8e-16 

 gi|226746|prf||1604384A  ras oncogene                                   82   1e-15 

 gi|131874|sp|P01114|RASH_RRASV  Transforming protein p29 [Contain...    81   2e-15 

 gi|420621|pir||S34138  transforming protein (K-ras) - Kirsten mur...    75   9e-14 


Sequences with E-value WORSE than threshold


 gi|21637094|gb|AAM70311.1|  helicase 2 [Phthorimaea operculella g...    29   6.1   

 gi|15021457|gb|AAK77734.1|  ORF65 [shrimp white spot syndrome virus]    29   9.3   

 gi|17158195|ref|NP_477613.1|  wsv091 [shrimp white spot syndrome ...    29   9.3   









Alignments

>gi|55819093|ref|YP_142568.1|   RAS family GTPase [Acanthomoeba polyphaga mimivirus]
 gi|55416837|gb|AAV50487.1|   RAS family GTPase [Acanthomoeba polyphaga mimivirus]
          Length = 215

 Score =  126 bits (317), Expect = 3e-29
 Identities = 64/183 (34%), Positives = 110/183 (60%), Gaps = 6/183 (3%)

Query: 9   FKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSR-VVNVGGKTVKLQIWDTAGQ 67
           +K ++IGS+G GKS ++HQF+ N+   + + TIG  F S+ V+   GKT+KL IWDTAGQ
Sbjct: 14  YKIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDTAGQ 73

Query: 68  ERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDP 127
           ERFRS+T+ YY  + G L+V+D+T RE+++ +  W+ D R        +++  NK D+D 
Sbjct: 74  ERFRSITKMYYTNSLGCLVVFDVTDRESFDDVYYWINDLRINCHTTYYILVVANKIDIDK 133

Query: 128 ER-EVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERMGSG 186
               V+  E  +F ++N+  ++  S+   + V   F K    +++K+   +++P+   + 
Sbjct: 134 NNWRVSENEIKKFCRDNDCDYVFASSFESDTVNNLFGK----MIDKMSEIKINPDSRRND 189

Query: 187 IQY 189
           I Y
Sbjct: 190 IIY 192



>gi|131877|sp|P01117|RASK_MSVKI   Transforming protein p21 (K-Ras) (Ki-Ras)
 gi|68937|pir||TVMV2K   transforming protein K-ras-1 - Kirsten murine sarcoma virus
 gi|332193|gb|AAA46572.1|   p21 kis peptide
          Length = 189

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 7/177 (3%)

Query: 9   FKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQE 68
           +K +V+G++G GKS L  Q I+N F  + + TI   +  +VV + G+T  L I DT GQE
Sbjct: 4   YKLVVVGASGVGKSALTIQLIQNHFVDEYDPTIQDSYRKQVV-IDGETCLLDILDTTGQE 62

Query: 69  RFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTD-ARTLASPNIVVILCGNKKDLDP 127
            + ++   Y R   G L V+ I + +++  +  +     R   S ++ ++L GNK DL P
Sbjct: 63  EYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQLKRVKDSEDVPMVLVGNKCDL-P 121

Query: 128 EREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI----LNKIDSGELDP 180
            R V   +A   A+   + F+ETSA T + VE+AF    R I    L KI   E  P
Sbjct: 122 SRTVDTKQAQELARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKISKEEKTP 178



>gi|939930|emb|CAA80675.1|   proto-oncogene protein [Kirsten murine sarcoma virus]
          Length = 188

 Score = 88.6 bits (218), Expect = 9e-18
 Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 3/162 (1%)

Query: 9   FKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQE 68
           +K +V+G+ G GKS L  Q I+N F  + + TI   +  +VV + G+T  L I DTAGQE
Sbjct: 4   YKLVVVGACGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQE 62

Query: 69  RFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTD-ARTLASPNIVVILCGNKKDLDP 127
            + ++   Y R   G L V+ I + +++  +  +     R   S ++ ++L GNK DL P
Sbjct: 63  EYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDL-P 121

Query: 128 EREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
            R V   +A   A+   + F+ETSA T + V++AF    R I
Sbjct: 122 SRTVDTKQAQELARSYGIPFIETSAKTRQGVDDAFYTLVREI 163



>gi|131872|sp|P23175|RASH_MSVNS   Transforming protein p21
 gi|68934|pir||TVMVNS   transforming protein ras - NS.C58 murine sarcoma virus
 gi|332198|gb|AAA46574.1|   p21 protein
          Length = 189

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 3/162 (1%)

Query: 9   FKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQE 68
           +K +V+G+ G GKS L  Q I+N F  + + TI   +  +VV + G+T  L I DTAGQE
Sbjct: 4   YKLVVVGARGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQE 62

Query: 69  RFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTD-ARTLASPNIVVILCGNKKDLDP 127
            + ++   Y R   G L V+ I + +++  +  +     R   S ++ ++L GNK DL  
Sbjct: 63  EYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDL-A 121

Query: 128 EREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
            R V   +A   A+   + ++ETSA T + VE+AF    R I
Sbjct: 122 ARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREI 163



>gi|131870|sp|P01113|RASH_MSV   Transforming protein p21
 gi|68930|pir||TVMVB   transforming protein H-ras - BALB murine sarcoma virus
 gi|332200|gb|AAA46575.1|   p21 transforming protein
          Length = 189

 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 54/162 (33%), Positives = 87/162 (53%), Gaps = 3/162 (1%)

Query: 9   FKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQE 68
           +K +V+G+ G GKS L  Q I+N F  + + TI   +  +VV + G+T  L I DTAGQE
Sbjct: 4   YKLVVVGAKGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQE 62

Query: 69  RFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTD-ARTLASPNIVVILCGNKKDLDP 127
            + ++   Y R   G L V+ I + +++  +  +     R   S ++ ++L GNK DL  
Sbjct: 63  EYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDL-A 121

Query: 128 EREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
            R V   +A   A+   + +++TSA T + VE+AF    R I
Sbjct: 122 ARTVESRQAQDLARSYGIPYIKTSAKTRQGVEDAFYTLVREI 163



>gi|131871|sp|P01115|RASH_MSVHA   Transforming protein p29 [Contains: Transforming protein p21]
 gi|68933|pir||TVMV3H   transforming protein H-ras - Harvey murine sarcoma virus
 gi|332188|gb|AAA46569.1|   protein p30
 gi|332185|gb|AAA46568.1|   transforming protein p21 has
          Length = 241

 Score = 82.8 bits (203), Expect = 6e-16
 Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 3/162 (1%)

Query: 9   FKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQE 68
           +K +V+G+ G GKS L  Q I+N F  + + TI   +  +VV + G+T  L I DT GQE
Sbjct: 56  YKLVVVGARGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTTGQE 114

Query: 69  RFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTD-ARTLASPNIVVILCGNKKDLDP 127
            + ++   Y R   G L V+ I + +++  +  +     R   S ++ ++L GNK DL  
Sbjct: 115 EYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDL-A 173

Query: 128 EREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
            R V   +A   A+   + ++ETSA T + VE+AF    R I
Sbjct: 174 GRTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREI 215



>gi|61559|emb|CAA25322.1|   transforming protein p21 [Murine sarcoma virus]
          Length = 189

 Score = 82.8 bits (203), Expect = 6e-16
 Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 3/162 (1%)

Query: 9   FKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQE 68
           +K +V+G+ G GKS L  Q I+N F  + + TI   +  +VV + G+T  L I DT GQE
Sbjct: 4   YKLVVVGARGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTTGQE 62

Query: 69  RFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTD-ARTLASPNIVVILCGNKKDLDP 127
            + ++   Y R   G L V+ I + +++  +  +     R   S ++ ++L GNK DL  
Sbjct: 63  EYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDL-A 121

Query: 128 EREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
            R V   +A   A+   + ++ETSA T + VE+AF    R I
Sbjct: 122 ARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREI 163



>gi|332189|gb|AAA46570.1|   p21 v-has transforming protein
          Length = 189

 Score = 82.4 bits (202), Expect = 8e-16
 Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 3/162 (1%)

Query: 9   FKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQE 68
           +K +V+G+ G GKS L  Q I+N F  + + TI   +  +VV + G+T  L I DT GQE
Sbjct: 4   YKLVVVGARGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTTGQE 62

Query: 69  RFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTD-ARTLASPNIVVILCGNKKDLDP 127
            + ++   Y R   G L V+ I + +++  +  +     R   S ++ ++L GNK DL  
Sbjct: 63  EYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDL-A 121

Query: 128 EREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
            R V   +A   A+   + ++ETSA T + VE+AF    R I
Sbjct: 122 GRTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREI 163



>gi|226746|prf||1604384A   ras oncogene
          Length = 189

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 3/162 (1%)

Query: 9   FKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQE 68
           +K +V+G+ G GKS L  Q I+N F  + + TI   +  +VV + G+T  L I DT GQE
Sbjct: 4   YKLVVVGARGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETKLLDILDTTGQE 62

Query: 69  RFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTD-ARTLASPNIVVILCGNKKDLDP 127
            + ++   Y R   G L V+ I + +++  +  +     R   S ++ ++L GNK DL  
Sbjct: 63  EYSAMRDQYMRTGEGFLKVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDL-A 121

Query: 128 EREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
            R V   +A   A+   + ++ETSA T + VE+AF    R I
Sbjct: 122 ARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREI 163



>gi|131874|sp|P01114|RASH_RRASV   Transforming protein p29 [Contains: Transforming protein p21]
 gi|68932|pir||TVMVRS   transforming protein p29 (ras) - Rasheed rat sarcoma virus
 gi|333964|gb|AAA47420.1|   p29 transforming protein
          Length = 248

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 3/162 (1%)

Query: 9   FKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQE 68
           +K +V+G+ G GKS L  Q I+N F  + + TI   +  +VV + G+T  L I DTAGQE
Sbjct: 63  YKLVVVGARGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQE 121

Query: 69  RFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTD-ARTLASPNIVVILCGNKKDLDP 127
            + ++   Y R   G L V+ I + +++  +  +     R   S ++ ++L GNK DL  
Sbjct: 122 EYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDL-A 180

Query: 128 EREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
              V   +A   A+   + ++ETSA T   VE+AF    R I
Sbjct: 181 AHTVESRQAQDLARSYGIPYIETSAKTRPGVEDAFYTLVREI 222



>gi|420621|pir||S34138   transforming protein (K-ras) - Kirsten murine sarcoma virus
          Length = 188

 Score = 75.5 bits (184), Expect = 9e-14
 Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 3/162 (1%)

Query: 9   FKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQE 68
           +K +V+G+ G GKS L  Q I+N F  + + TI   +  +VV + G+T  L I DTAGQE
Sbjct: 4   YKLVVVGAVGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IHGETCLLDILDTAGQE 62

Query: 69  RFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTD-ARTLASPNIVVILCGNKKDLDP 127
            + ++   Y R   G L V+ I + +++  +  +     R   S ++ ++L GNK DL P
Sbjct: 63  EYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDL-P 121

Query: 128 EREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
            R V   +A   A+   + F+ETSA T + V++AF    R I
Sbjct: 122 SRTVDTKQAQELARSYGIPFIETSAKTRQGVDDAFYTLVREI 163



>gi|21637094|gb|AAM70311.1|   helicase 2 [Phthorimaea operculella granulovirus]
 gi|21686778|ref|NP_663278.1|   helicase 2 [Phthorimaea operculella granulovirus]
          Length = 439

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 2  AETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKT 56
          A+ +D +F   V GSAGTGKS LL    ++   Q    ++         N+GG+T
Sbjct: 48 AQKFDPIF---VSGSAGTGKSALLIALRDHWLSQGKCVSVAAYTHLAARNIGGRT 99



>gi|15021457|gb|AAK77734.1|   ORF65 [shrimp white spot syndrome virus]
          Length = 1146

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 63  DTAGQERFRS--VTRSYYRGAAGALLVYDITSRETYNSLAAWL 103
           DTAG +RFR+  +TRS Y  AA A+    I     YN  + +L
Sbjct: 353 DTAGVKRFRNYILTRSNYASAARAVYEASIKGTVYYNDKSKFL 395



>gi|17158195|ref|NP_477613.1|   wsv091 [shrimp white spot syndrome virus]
 gi|17016489|gb|AAL33095.1|   wsv091 [shrimp white spot syndrome virus]
          Length = 1145

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 63  DTAGQERFRS--VTRSYYRGAAGALLVYDITSRETYNSLAAWL 103
           DTAG +RFR+  +TRS Y  AA A+    I     YN  + +L
Sbjct: 353 DTAGVKRFRNYILTRSNYASAARAVYEASIKGTVYYNDKSKFL 395






  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF excluding environmental samples
    Posted date:  Mar 8, 2005  8:16 PM
  Number of letters in database: 800,338,354
  Number of sequences in database:  2,355,158
  
Lambda     K      H
   0.319    0.134    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,412,118
Number of Sequences: 2355158
Number of extensions: 231953
Number of successful extensions: 322
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 315
Number of HSP's gapped (non-prelim): 3
length of query: 213
length of database: 67,220,366
effective HSP length: 105
effective length of query: 108
effective length of database: 40,826,936
effective search space: 4409309088
effective search space used: 4409309088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)