T-COFFEE, Version_1.37(Wed Jul 11 14:38:06 PDT 2001)
Notredame, Higgins, Heringa, JMB(302)pp205-217,2000
CPU TIME:0 sec.
SCORE=76
*
 BAD AVG GOOD
*
1ajsA        :  80
aat2_arath   :  80
aatm_human   :  79
aatm_lupan   :  78
aatc_yeast   :  79
aat_haein    :  80
aat_ecoli    :  78
phhc_pseae   :  76
tyrb_ecoli   :  77
2dkb         :  23

1ajsA        -------WVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRV
aat2_arath   RTEEGKPLVLDVVRKAEQQLVNDPSRVKEYIPIVGISDFNKLSAKLILGADSPAITESRV
aatm_human   RDDNGKPYVLPSVRKAEAQIAA-KNLDKEYLPIGGLAEFCKASAELALGENSEVLKSGRF
aatm_lupan   RTEELQPYVLKVVNKAENLML-ERGQNKEYLAIEGLAAFNKATAELLLGADNPAIKQQRV
aatc_yeast   RDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDAFQEDRV
aat_haein    KDAQGTTPIMHAVKEAEKRLFD-KEKTKNYLTIDGIADYNEQTKALLFGKDSEVIQSNRA
aat_ecoli    KDETGKTPVLTSVKKAEQYLLE-NETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRA
phhc_pseae   KDAQGLTPILRSVKLAEQRLVE-QETTKSYVGGHGDALFAARLAELALGAASPLLLEQRA
tyrb_ecoli   YNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRV
2dkb         ------SAVLGHCHPEIVSVIGEYAGKLDHLFSEMLSRPVVDLATRLANITPPGLDRALL

Cons                  :         :         ::                 .     :     


1ajsA        GGVQSLGGTGALRIGAEFLARW--------YNGTNNKDTPVYVSSPTWENHNGVFTTAGF
aat2_arath   TTVQCLSGTGSLRVGAEFLKTH--------YHQS-----VIYIPKPTWGNHPKVFNLAGL
aatm_human   VTVQTISGTGALRIGASFLQRF--------FKFSR----DVFLPKPTWGNHTPIFRDAGM
aatm_lupan   ATVQGLSGTGSLRLGAALIERY--------FPGA-----KVLISAPTWGNHKNIFNDARV
aatc_yeast   ISVQSLSGTGALHISAKFFSKF--------FPDK-----LVYLSKPTWANHMAIFENQGL
aat_haein    RTVQSLGGTGALRIAAEFIKRQ--------TKAQ-----NVWISTPTWPNHNAIFNAVGM
aat_ecoli    RTAQTPGGTGALRVAADFLAKN--------TSVK-----RVWVSNPSWPNHKSVFNSAGL
phhc_pseae   DATQTPGGTGALRLAGDFIAHC--------LPGR-----GIWLSDPTWPIHETLFAAAGL
tyrb_ecoli   ATIQTLGGSGALKVGADFLKRY--------FPES-----GVWVSDPTWENHVAIFAGAGF
2dkb         LSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTG-----AAASATYSAGRKGVGPAAV

Cons               .. .::::.  .                         . .::      .    .


1ajsA        --K---------DIR----SYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTG
aat2_arath   --S----------VE----YFRYYDPATRGLDFKGLLEDLGAAPSGAIVLLHACAHNPTG
aatm_human   --Q----------LQ----GYRYYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTG
aatm_lupan   --P----------WS----EYRYYDPKTVGLDFEGMIEDIKAAPEGTFVLLHGCAHNPTG
aatc_yeast   --K----------TA----TYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTG
aat_haein    --T----------IR----EYRYYDAERKALDWEHLLEDLSQASEGDVVLLHGCCHNPTG
aat_ecoli    --E----------VR----EYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG
phhc_pseae   --K----------VS----HYPYVSADNR-LDVEAMLAGLERIPQGDVVLLHACCHNPTG
tyrb_ecoli   --E----------VS----TYPWYDEATNGVRFNDLLATLKTLPARSIVLLHPCCHNPTG
2dkb         GSFAIPAPFTYRPRFERNGAYDYLAE----LDYAFDLIDRQSSGNLAAFIAEPILSSGGI

Cons                             : :       .     :           .: .    .   


1ajsA        TDPTPEQWKQIASVMKRRFLFPFFDSAYQGFAS-GN--------LEKDAWAIRYFV---S
aat2_arath   VDPTSEQWEQIRQLMRSKSLLPFFDSAYQGFAS-GS--------LDTDAQSVRTFV---A
aatm_human   VDPRPEQWKEIATVVKKRNLFAFFDMAYQGFAS-GD--------GDKDAWAVRHFI---E
aatm_lupan   IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS-GS--------LDEDAASVRLFV---A
aatc_yeast   LDPTSEQWVQIVDAIASKNHIALFDTAYQGFAT-GD--------LDKDAYAVRLGVEKLS
aat_haein    IDPTPEQWQELAALSAKNGWLPLFDFAYQGLAN-G---------LDEDAYGLRAFA---A
aat_ecoli    IDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR-G---------LEEDAEGLRAFA---A
phhc_pseae   FDLSHDDWRRVLDVVRRRELLPLIDFAYQGFGD-G---------LEEDAWAVRLFA---G
tyrb_ecoli   ADLTNDQWDAVIEILKARELIPFLDIAYQGFGA-G---------MEEDAYAIRAIA---S
2dkb         IELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTL--------

Cons          :        :      .  : ::* *  *..  *            *   :        


1ajsA        EGFELFCAQSFSKNFGLYNERVG----NLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQ
aat2_arath   DGGECLIAQSYTKNMGLYGERVG----ALSIVCKSADVASKVESQVKLVVRPMYSSPPIH
aatm_human   QGINVCLCQSYAKNMGLYGERVG----AFTMVCKDADEAKRVESQLKILIRPMYSNPPLN
aatm_lupan   RGLEVLVAQSYSKNLGLYAERIG----AINVISSSPESAARVKSQLKRIARPMYSNPPVH
aatc_yeast   TVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAY
aat_haein    NHKELLVASSFSKNFGLYNERVG----AFTLVAENAEIASTSLTQVKSIIRTLYSNPASH
aat_ecoli    MHKELIVASSYSKNFGLYNERVG----ACTLVAADSETVDRAFSQMKAAIRANYSNPPAH
phhc_pseae   ELPEVLVTSSCSKNFGLYRDRVG----ALIVCAQNAEKLTDLRSQLAFLARNLWSTPPAH
tyrb_ecoli   AGLPALVSNSFSKIFSLYGERVG----GLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNF
2dkb         -----------SKTLG-----AGLPLAAIVTSAAIEERAHEL-GYLFYTTHVSDPLPAAV

Cons                    :*  .      *         .            :    :   . *.  


1ajsA        GARIVARTLSDPELFHEWTGN-----------------VKTMADRILSMRSELRARLEAL
aat2_arath   GASIVATILKSSDMYNNWTIE-----------------LKEMADRIKSMRQQLFEAIQAR
aatm_human   GARIAAAILNTPDLRKQWLQE-----------------VKGMADRIIGMRTQLVSNLKKE
aatm_lupan   GARIVADIVGNPALFDEWKVE-----------------MEMMAGRIKNVRQQLYDSISSK
aatc_yeast   GAKIVAKLLETPELTEQWHKD-----------------MVTMSSRITKMRHALRDHLVKL
aat_haein    GGATVATVLNDAQLRQEWENE-----------------LTEMRERIKKMRHLFVQLLKEY
aat_ecoli    GASVVATILSNDALRAIWEQE-----------------LTDMRQRIQRMRQLFVNTLQEK
phhc_pseae   GAEVVAAILGDSELKGLWQEE-----------------VEGMRSRIASLRIGLVEALAPH
tyrb_ecoli   GAQVVAAVLNDEALKASWLAE-----------------VEEMRTRILAMRQELVKVLSTE
2dkb         GLRVL-DVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTK

Cons         *       :    :                        :  :  *   :   :       


1ajsA        KTPG-TWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATS
aat2_arath   GTPG-DWSHIIKQIGMFTFTGLNKEQVEFMTKEFHIYMTSDGRISMAGLSSKTVPHLADA
aatm_human   GSTH-NWQHITDQIGMFCFTGLKPEQVERLIKEFSIYMTKDGRISVAGVTSSNVGYLAHA
aatm_lupan   DKSGKDWSFILKQIGMFSYTGLNKNQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADA
aatc_yeast   GTPG-NWDHIVNQCGMFSFTGLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYVAKA
aat_haein    GAEQ-DFSFIIEQNGMFSFSGLTGEQVDRLKNEFAIYAVRSGRINVAGITEDNIRYLCES
aat_ecoli    GANR-DFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEA
phhc_pseae   GLAE-RFAHVGAQRGMFSYTGLSPQQVARLRDEHAVYLVSSGRANVAGLHARRLGRLAQA
tyrb_ecoli   MPER-NFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKA
2dkb         EPADGLGAKITREC-M--NLGLSMN-IVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQA

Cons                  :  :  *    **.      :     ::          .        :  :


1ajsA        IHEAVTKIQ
aat2_arath   MHAAVTRL-
aatm_human   IHQVTK---
aatm_lupan   IIDSFHYVS
aatc_yeast   IDEVV----
aat_haein    IVKVL----
aat_ecoli    IVAVL----
phhc_pseae   IAQ------
tyrb_ecoli   FAAVM----
2dkb         IERAL----

Cons         :