AATGAGTGAGTTAGAGCTGCTGGCGAAGATATTAAGATACTGGAGGG orf 181
            AAAAAGGGCTTGTCTTCCTGTAGCATAGAGTGTATAATGTGAGTATCATACAGTAT orf 172
            AAAAAGTTATTGACATAGTTATAGTCCCAGTTATATACTATTATCAAATGATAC  orf 166
               AATATATTGACAATATGTTATAGCCAGCATATACTGATGTTACAGGCTGG orf 162
               AGCTCATTGGCTGCTTCTTTTGTGTATAATACATTAAAAATACAGGAGGA orf 161
               CACCTATTGACACCCTATAACTTATGCTATACAATATGAGTAAGATACA orf 158
               ATTTTATTGACATTGTTACAGACTTATGTTATACTGACTCCAAAGGAGG orf 154
               TACATGTTGACTTTCAATCAATACCGTGATACGATGTAGTCAACAACAAA orf 142
               AAACACTTGTCAGGAGTTACAGAGTATGTTATAGTATAGTTAAG tRNA-Asn
           TGGTATAATTGAAATAGAGACTTAATAGTTCTATATTATACATATAAGGAGGC orf 133
               AAAATTTATGAACAAAGTAGTGTATCTGCTATATTATCAGAAGTAACAAGGC  orf 131
              TGAAAATTAAGAAAAATCAGTACAAAGTGCTATATTAAGGTCATGAACACCTAACAGGGG orf 129
          ATTACAGTTACTTTACAATCCTGTAACATATGTCTATTACGAAGTTCTTT orf 120
           AAAAAACTATTGACGATATGTAATCTAGTAAATATAATAGAGTTACAAGGTTTTACA  orf 119
                    AAAAATAGACGAACAATTTACTGCTATATTATTAATGAGAATACAT orf 118
   CCTCTTCTTTTCTTGTTTATAGGGACCTTTAATGTTCGTGCTATAATAGTATATGAAGGGGTTTA  orf 115
       TACGGAGTAGCTCACGAGGTACTTACTGTTTGTATGTTATAATAGATATACAGGCAGCTAAGTACCTTTTCTATAACA orf 112
      AGTGATCTAAGACAGGTGGATAACCTGTCTTTTCTTATATTATTAAAGAGAGGTGAGATA orf 108
                GATTCATCGGCTCTTTTTTGTTGTATGGTATAATAAGTTTATGGAACTAGATAC orf 102
     AAAATAAGACAGACTATTGATAAGACTGTATTTTTGTGATACAATAGAGGGTGAGATACAGAATCTATAGGAGGA orf 98
         AAAAATTAAGTATTGACGACTCTGTATTATGTGCTATAATTTGACTATACAATATTACGAATGGAGGAA orf 96
       TGATACAGACCTGTTTACAGAGCAGTGTATAACTGATATACTGTTTAACAAACAAGGAGGGA orf 95
            TTTTTTGTGTTGACATAACATACAGCCTCTGTTATAATCAAGTTACAACGTAATATA orf 93
               AAAGTGTTGACAACATATACACTGTATGATATAGTGTATTGTATAGTCACAATATAAGGAGGA orf 90
  TTTTTATGAATTTAGGGACTATACAAACACTATATTATGTGTTACAATATGACTGTAACCTTCTTAAAA orf 84
             TTTTTTTGTTGACAGGGGAGTTATACCGTGATAGACTGTAACTATCTTATAAAATACAAGGAGG  orf 78
            AAAATACAGTTGACATACAGTCTTGGTTATAGTAAGATATAAGTACAGCGGAGGGGTAAT orf 66
     AACTTGTTTATAACAGTTGACATATGTTATAATGTATGTTAGACTGTCATTATAGTAACAAAATAAA orf 64
            GTGAATAGAGCCTAGTTTAACGACTAGGCTTTTATATCAAATTTTGTACATATGAGAAGTAATAACAACTGG orf 63 ?
           AATATTTTTATTGACTATTTGCAAGAGCCCTGATAGAATACAGTTACAGGGTAA orf 58
                   CACACACTAAGGTTACAGGGTATGTTATAATAAAACACAGGGAGG  orf 57
      AGAGTAGACACCCTTCTGTAACTATGCTATACTAAGGCTATAAAATACAGAGGAG orf 54
        TTAGCTGCTAGGCTCCGGCTTAGTGGCTTTTTGTGTATATAATCCAGACAATATTAGGGGG orf 52
         AAATAGAGGAAGTTTACATTGTAACCCCGCCATGTTATACTTCCTGTATAAAGTCT orf 51
            AAAAAAGTGTTGCCTTTTTCTTTTATACACTGTATAATATACATAAGACATACAGGTGG orf 50
              AAAACCGTTGACAGTAACAAGACTGTATGATATTCTCTAAATATAGCAATTACATAAGC orf 41
             AAAAGGTGTTGACTAAAAGAAAACACCATGTTATAGTTAGAATAACAAATGAGTTACAGAATTAGGAGG orf 37
             AAAAACTATAGACAGTAATATAACTGTATGTTACACTGTTTACAGATAACAAATACAGGG orf 30
          AAAAAAAGTGGTTGACACCTTGTCAATTGAGACTGTATGATACAGACATTGATACAGACAGAATGAAGGAGAGG orf 27
              AAAGGGGTTGACTTTCAGTCAGCTCCTTTTTATACTGGGTACAGAAGCTGTAACAAGGACTATAAAA  orf 2
   AAAACACAGCGGATTAAATAGACAGGCGGTCTTAGTCTTATATTGGGATAGAGACCGTCTGTAGCAGTAGGAGGGG  orf262
          GTATAAAACTGTAGACAGCGCATAGTCTGTATGTTATACTCTGGTTACAG orf258
           AAAAAATGTGTTGACCGATCGTCAATACCGTTATATACTAGAGTTAAGAAAGACAGGGAGGG orf242
             AAAAGGTGTTGACTTTAAATCAATAAGGTAGTATACTTAGCTTATCAAACAAAGGAGAGA orf241
            AAAAGGGTGTTGACTTTAAATCAATACCCTGCTATACTAAAATTATCAACTACAGGGAGC orf240
            AAAAAGGTGTTGACTTTAAATCAATACCCTGATATACTTAAATCATACCGACCGAGGAGGAG orf239
           AAAAAGGGTGTTGACTTTAAATCAATACCCTGATATACTTAAGTTATAGCAAGGGAA orf238
           AAAAAAGGTATTGACTTTAAATCAATGGAATGGTATACTGTAAATATAGAAGGAAGAGGAGG orf235
AAAAAAACTTTATAAAAGGTGTTGACTTTAAATCAATACCCTGATATACTTAAGATATACCAAGTGAGGGAGAG orf234
           AAAACATGTAATATAGGCACGCCTGCCGCATATACTGTACCATTAAACGAAGG  orf232
              AAAGTAGTTGACTTACAGTCAATAGGATGTTATGATAAGTACATAAGAAAAACAGAGGAGAG  orf231
            AAAAAGATATTGACCTTGAATCAACTAGAGGTTATAATGAAGTTAAGACAAAGTCCTAATTTTATATA orf230
            AAAAAGGTGTTGACTTTAAATCAACTAGATGTTACAATGAAGTTAAGATAAAATAAAGGAGAGA orf228
        AAAAAAAAAACTATTGACTCGATGTCAACAGCGTGGTAAGCTTAAAGCATAGAGAGGAGA orf226
            AAAAACATATTGACAATGAGTCAATAACATTATATAATAAAATTAACAAAACAAAGGGAGAG  orf223
            AAAAACCTGTTGACTTTAAATCAATAACAGTATATAATAAAATTAACAAATCAAAGGGAGAG orf222
            AAAATTGTATTGACTGTCAGACAATGAGTGTATATAATAGAATCAGAAGCAGAGGGCG  orf219
           ATAATAAGTGTTGACATAACATACAGACCATGTTACACTATAGTTACAGGTAAGGGAGAGA orf212
            AAAAATGTGTTGACAGTTAGTCAACATACATAGTATAATAAGAGTATAAAGAACAGGGGG orf210
         TTTAAAAAGCGGTTGACTTTAAATCAATATGCTGATATACTTAAGACATACCAATAAGGGAGG  orf205
          TAAAAAACCTGTTGACTTTAAATCAATACCCTGATATACTTAAATCATACCAAACAAGGAGGGTAA  orf204
           TAAAAGTTAGTTGACTTTAAATCAATAGCTTGATATACTTAAATCATACCAAACAAGGGAGAGAATAAA orf203
  TTTTTTTTCTAAAAAGGTGTTGACAGTCAGTCAATACAGTGATATACTTAATACATACCAATAAGGGAGAGATGCTATATGTTC orf202
          TATATAAGGGGTTGACTTCTAGTCAATCCTTTAGTATACTTAAGTCATACCAAAACAAAGGAGCG orf201
          TATAAAAAGGGTTGACTTTAAGACAATAAGGTGATATACTTAAGACATACCAAACAGGAGGTACA orf200
        TGTAAAATAGGTGTTGACTTTGCGTCAATACGGTGTTATACTAAATACATACTAATAAGGGAGCTGGATAAA orf199
             GAAAAGTGTTGACTTTGTGTCAATATCCTGTTATACTTTTACTATACCAACTATGGAGGG  orf197
AAAAAAAGCTTTAAATATGGGTTGACTTTATGTCAATCCATATGATATACTTGAACTAACAAATTAAAGGGAGAG orf195
  AAAAAATGTATATTATGGGTTGACTTCTGGTCAACTCATATGGTATCATTATAACTGTAAAGAGCATTACATA orf194
       TTTCTAAAAAGGTGTTGACTATCGGTCAATAAGGTGATATACTTAAGTCATACCAAAACAAAGGGAGCG orf193
       TTTTATGATTAGTGTTGACTTTAAGACAATAAGGTGATATACTTAAGACATACCAAAGCAGGAGGGAA orf192
 

• Diagnosed promoters from left end (at bottom) to right end (at top) of the genome.
• Base promoter prediction by procaryotic option of Martin Reese's Neural Network Promoter Prediction Tool. (http://www.fruitfly.org/seq_tools/promoter.html). Reese MG, 2001. ``Application of a time-delay neural network to promoter annotation in the Drosophila melanogaster genome''. Comput Chem 26(1),51-6.
• Refinement by fitting to TTGAC[AT] at -35 and TGxTATAYT  (bold) at -10 and positioning within noncoding region (refer to individual orf entry SIGNAL records in phageDfeav2 database).
• Extraordinary homogeneity of terminal repeat promoters indicated by color.
• Note similarity in organization to 12.5 kb terminal repeat in SPO1 - host takeover region (Stewart et al., 1998).