P89.3 - P89.4- DNA Maturase

Index.

Full sequence 89.3-89.4
Blast information on sequnce
Blast Alignment
Pfam information on sequence
Smith & Waterman information on sequence
T7 maturase Blast

Full sequence of 89.3-89.4- from the NCBI "ORF finder"

MNTTASDDQNDIPLEDPRLIELREACLHSLWIFAQAVEPHRVYGECHKELFDWWQEMELEEVLNTLALMP
RDHQKSHCIAVWVCWQIFKNPAVTIAYVCATESLAILQLYDIKQILTSDEFTRLSPDMIEPMEKKRQKWA
ETAIIVDHPIRKKERPRDPTVLATGLDSNNIGAHCNIMVKDDVVIDKNSLTETARQKVEAKAGHLSSILT
TDGMEFCVGTRYHPKDHYQTLIDMTEEVWEGDQLVGERPVYAVHTRVVEVEGVFLWPRMARESDGKMFGF
DRAQLSRKKAKYRKDMRNFYCQYYNDPNAINEGGIEKSMFLYYDKEKVVRRKGSWWVGKRKVNIIACQDF
AYSVQTGSDWTALFILGMDKDKRIYILDIVRYQTKKPSVYWKNLETAYNKWKFRWVRAEAVAAQEVIIEA
LREYAEKEQCPIRIKAYKPNSQSGDKETRISQTLEPLYENGDIYHYRGGLCDMLEEELTQDRPPHDDLKD
CLHIGVGFDKLKPPAEDDDEEDYDNYHDPHASYSYDPNNRFGGLQ

Blast information on sequence:

Query=
(535 letters)

Database: nr
708,648 sequences; 223,308,850 total letters

Round 14

Score E
Sequences producing significant alignments: (bits) Value

         gi|9627482|ref|NP_042010.1| gene 19, DNA maturation protein [Bac...   312 6e-84
         gi|9634048|ref|NP_052122.1| DNA packaging protein B [Bacteriopha...   310 2e-83
         gi|11281035|pir||H81123 hypothetical protein NMB1094 [imported] ...   309 4e-83
         gi|11281037|pir||C81900 hypothetical protein NMA1313 [imported] ...   304 8e-82
         gi|11281036|pir||G81811 hypothetical protein NMA1852 [imported] ...   304 1e-81
         gi|137614|sp|P10310|VDMB_BPT3 DNA MATURASE B (DNA PACKAGING PROT...   304 1e-81
         gi|10176157|dbj|BAB07252.1| (AP001519) BH3533~unknown conserved ...   265 9e-70
         gi|231610|sp|P29790|ATPG_TOBAC ATP SYNTHASE GAMMA CHAIN, CHLOROP...   254 1e-66
         gi|114639|sp|P00837|ATPG_ECOLI ATP SYNTHASE GAMMA CHAIN >gi|6787...   252 4e-66
         gi|148138|gb|AAA24736.1| (J01594) ATP synthase gamma subunit (at...   252 4e-66
         gi|6625702|gb|AAF19361.1|AF188265_7 (AF188265) ATP synthase subu...   252 8e-66
         gi|9964611|ref|NP_064742.1| gp4 [Roseophage SIO1] >gi|9944302|gb...   244 2e-63
         gi|114647|sp|P12990|ATPG_VIBAL ATP SYNTHASE GAMMA CHAIN >gi|7924...   241 1e-62
         gi|114634|sp|P12408|ATPG_ANASP ATP SYNTHASE GAMMA CHAIN >gi|7975...   240 2e-62
         gi|2493034|sp|Q41075|ATPG_PHATR ATP SYNTHASE GAMMA CHAIN, CHLORO...   240 3e-62
         gi|114643|sp|P05435|ATPG_SPIOL ATP SYNTHASE GAMMA CHAIN, CHLOROP...   236 4e-61
         gi|114636|sp|P20602|ATPG_BACME ATP SYNTHASE GAMMA CHAIN >gi|9814...   235 7e-61
         gi|1168597|sp|P43716|ATPG_HAEIN ATP SYNTHASE GAMMA CHAIN >gi|107...   235 8e-61
         gi|11266792|pir||G82036 ATP synthase F1, gamma chain VC2765 [imp...   234 1e-60
         gi|461550|sp|Q01908|ATP1_ARATH ATP SYNTHASE GAMMA CHAIN 1, CHLOR...   233 3e-60
         gi|543876|sp|Q06908|ATPG_ODOSI ATP SYNTHASE GAMMA CHAIN, CHLOROP...   232 5e-60
         gi|114644|sp|P08450|ATPG_SYNP6 ATP SYNTHASE GAMMA CHAIN >gi|6787...   232 6e-60
         gi|13431312|sp|Q9L6B6|ATPG_PASMU ATP SYNTHASE GAMMA CHAIN >gi|77...   232 8e-60
         gi|7436159|pir||C69592 H+-transporting ATP synthase (EC 3.6.1.34...   231 1e-59
         gi|11347477|pir||D82952 ATP synthase gamma chain PA5555 [importe...   230 2e-59
         gi|461582|sp|Q05384|ATPG_SYNP1 ATP SYNTHASE GAMMA CHAIN >gi|4805...   230 2e-59
         gi|728932|sp|P41169|ATPG_THIFE ATP SYNTHASE GAMMA CHAIN >gi|1546...   230 2e-59
         gi|584816|sp|P37810|ATPG_BACSU ATP SYNTHASE GAMMA CHAIN >gi|2118...   228 1e-58
         gi|114640|sp|P28552|ATPG_PEA ATP SYNTHASE GAMMA CHAIN, CHLOROPLA...   227 1e-58
         gi|12061045|gb|AAG48362.1|AF330160_9 (AF330160) ATP synthase gam...   227 1e-58
         gi|114645|sp|P17253|ATPG_SYNY3 ATP SYNTHASE GAMMA CHAIN >gi|6787...   226 4e-58
         gi|421743|pir||S32401 H+-transporting ATP synthase (EC 3.6.1.34)...   225 9e-58
         gi|114635|sp|P22482|ATPG_BACFI ATP SYNTHASE GAMMA CHAIN >gi|8009...   222 4e-57
         gi|114646|sp|P09222|ATPG_BACP3 ATP SYNTHASE GAMMA CHAIN PRECURSO...   222 5e-57
         gi|1333799|emb|CAA30654.1| (X07804) TF1-gamma subunit (AA 1 - 28...   222 6e-57
         gi|114638|sp|P12113|ATPG_CHLRE ATP SYNTHASE GAMMA CHAIN, CHLOROP...   222 7e-57
         gi|42284|emb|CAA23597.1| (V00312) papC [Escherichia coli]             221 1e-56
         gi|11266790|pir||H82715 ATP synthase, gamma chain XF1144 [import...   220 2e-56
         gi|461551|sp|Q01909|ATP2_ARATH ATP SYNTHASE GAMMA CHAIN 2, CHLOR...   220 2e-56
         gi|10176379|dbj|BAB07474.1| (AP001519) ATP synthase gamma subuni...   220 3e-56
         gi|755801|emb|CAA68727.1| (Y00758) ATP synthase [Spinacia oleracea]   219 6e-56
         gi|1703748|sp|P50006|ATPG_SPIPL ATP SYNTHASE GAMMA CHAIN >gi|107...   218 1e-55
         gi|228698|prf||1808328A CF1 ATP synthase:SUBUNIT=gamma [Chlamydo...   216 4e-55
         gi|114642|sp|P07227|ATPG_RHORU ATP SYNTHASE GAMMA CHAIN >gi|6787...   214 1e-54
         gi|728930|sp|P41010|ATPG_BACCA ATP SYNTHASE GAMMA CHAIN >gi|5332...   213 2e-54
         gi|13786562|ref|NP_112694.1| TerL [Bacteriophage TP901-1] >gi|27...   212 7e-54
         gi|12724787|gb|AAK05863.1|AE006406_7 (AE006406) ATP synthase gam...   211 1e-53
         gi|1168595|sp|P42007|ATPG_BACST ATP SYNTHASE GAMMA CHAIN >gi|534...   209 4e-53
         gi|114641|sp|P05436|ATPG_RHOBL ATP SYNTHASE GAMMA CHAIN >gi|7955...   207 2e-52
         gi|2493033|sp|P95788|ATPG_STRMU ATP SYNTHASE GAMMA CHAIN >gi|743...   207 3e-52
         gi|13621937|gb|AAK33702.1| (AE006527) putative proton-translocat...   205 6e-52
         gi|6048352|gb|AAF02207.1|AF059739_7 (AF059739) H+-ATPase cytopla...   205 9e-52
         gi|11266806|pir||B81970 H+-transporting ATP synthase (EC 3.6.1.3...   204 1e-51
         gi|11131214|sp|P57123|ATPG_BUCAI ATP SYNTHASE GAMMA CHAIN >gi|10...   204 2e-51
         gi|11266809|pir||H81024 ATP synthase F1, gamma chain NMB1935 [im...   204 2e-51
         gi|4033370|sp|O51873|ATPG_BUCAP ATP SYNTHASE GAMMA CHAIN >gi|282...   202 5e-51
         gi|5708095|emb|CAB52365.1| (AJ245502) ATP synthase gamma chain, ...   202 7e-51
         gi|6478262|gb|AAF13778.1|AF129402_2 (AF129402) gamma subunit of ...   201 1e-50
         gi|543867|sp|P26360|ATP3_IPOBA ATP SYNTHASE GAMMA CHAIN, MITOCHO...   201 1e-50
         gi|11602916|ref|NP_065640.1| ATP synthase, H+ transporting, mito...   200 2e-50
         gi|13701898|dbj|BAB43190.1| (AP003136) ATP synthase gamma chain ...   200 3e-50
         gi|12644041|sp|O01666|ATPG_DROME ATP SYNTHASE GAMMA CHAIN, MITOC...   199 5e-50
         gi|4100656|gb|AAD00917.1| (AF001955) proton-translocating ATPase...   199 6e-50
         gi|12840425|dbj|BAB24848.1| (AK007063) putative [Mus musculus]        198 1e-49
         gi|231609|sp|P29710|ATPG_PROMO ATP SYNTHASE GAMMA CHAIN, SODIUM ...   198 1e-49
         gi|1929512|gb|AAB51465.1| (U64318) ATP synthase subunit gamma [M...   198 1e-49
         gi|2662325|dbj|BAA23754.1| (AB009314) proton-translocating ATPas...   197 2e-49
         gi|2493032|sp|P72246|ATPG_RHOCA ATP SYNTHASE GAMMA CHAIN >gi|152...   197 2e-49
         gi|14574453|gb|AAK68562.1|AC084158_10 (AC084158) Hypothetical pr...   197 2e-49
         gi|4885079|ref|NP_005165.1| ATP synthase, H+ transporting, mitoc...   197 3e-49
         gi|543875|sp|P36542|ATPG_HUMAN ATP SYNTHASE GAMMA CHAIN, MITOCHO...   197 3e-49
         gi|14278249|pdb|1FS0|G Chain G, Complex Of GammaEPSILON ATP SYNT...   195 6e-49
         gi|14193278|gb|AAK55869.1|AF267204_2 (AF267204) ATP synthase gam...   194 2e-48
         gi|1168596|sp|P43452|ATPG_ENTHR ATP SYNTHASE GAMMA CHAIN >gi|153...   193 2e-48
         gi|162717|gb|AAA30398.1| (M22463) ATP synthase gamma subunit pre...   193 3e-48
         gi|543874|sp|P05631|ATPG_BOVIN ATP SYNTHASE GAMMA CHAIN, MITOCHO...   193 3e-48
         gi|14193294|gb|AAK55881.1|AF267208_2 (AF267208) ATP synthase gam...   193 3e-48
         gi|13487831|ref|NP_108709.1| unknown; large sub-unit terminase [...   192 7e-48
         gi|10039451|dbj|BAB13359.1| (AB048368) H+-ATPase gamma subunit [...   191 9e-48
         gi|9757620|dbj|BAB08156.1| (AB046112) H+-ATPase gamma subunit [C...   191 1e-47
         gi|14193338|gb|AAK55914.1|AF267219_2 (AF267219) ATP synthase gam...   191 1e-47
         gi|728931|sp|P35435|ATPG_RAT ATP SYNTHASE GAMMA CHAIN, MITOCHOND...   190 3e-47
         gi|1703747|sp|Q10597|ATPG_MYCTU ATP SYNTHASE GAMMA CHAIN >gi|743...   189 5e-47
         gi|6478266|gb|AAF13781.1|AF129403_2 (AF129403) gamma subunit of ...   189 6e-47
         gi|3334123|sp|Q96250|ATP3_ARATH ATP SYNTHASE GAMMA CHAIN, MITOCH...   188 9e-47
         gi|11466530|ref|NP_044779.1| ATP synthase F1 subunit alpha [Recl...   188 9e-47
         gi|7436158|pir||T01103 probable H+-transporting ATP synthase (EC...   188 1e-46
         gi|13272347|gb|AAK17110.1|AF291051_7 (AF291051) ATP synthase gam...   186 4e-46
         gi|6729936|pdb|1MAB|G Chain G, Rat Liver F1-Atpase >gi|310190|gb...   186 4e-46
         gi|14193334|gb|AAK55911.1|AF267218_2 (AF267218) ATP synthase gam...   186 5e-46
         gi|14009439|dbj|BAB47390.1| (AB042438) mitochondrial ATP synthas...   185 7e-46
         gi|2662065|dbj|BAA23687.1| (AB006151) proton-translocating ATPas...   185 8e-46
         gi|13425166|gb|AAK25410.1| (AE006004) ATP synthase F1, gamma sub...   185 9e-46
         gi|1168598|sp|P45824|ATPG_MYCLE ATP SYNTHASE GAMMA CHAIN >gi|743...   185 1e-45
         gi|6478270|gb|AAF13784.1|AF129404_2 (AF129404) gamma subunit of ...   185 1e-45
         gi|1703746|sp|P50005|ATPG_ACEWO ATP SYNTHASE GAMMA CHAIN, SODIUM...   185 1e-45
         gi|2493030|sp|P56082|ATPG_HELPY ATP SYNTHASE GAMMA CHAIN >gi|743...   184 2e-45
         gi|14193314|gb|AAK55896.1|AF267213_2 (AF267213) ATP synthase gam...   183 3e-45
         gi|9256944|pdb|1E1Q|G Chain G, Bovine Mitochondrial F1-Atpase At...   183 4e-45
         gi|14193290|gb|AAK55878.1|AF267207_2 (AF267207) ATP synthase gam...   183 5e-45
         gi|9910637|sp|Q9ZK80|ATPG_HELPJ ATP SYNTHASE GAMMA CHAIN >gi|743...   182 5e-45
         gi|8568794|emb|CAB94543.1| (AL359152) ATP synthase gamma chain [...   181 1e-44
         gi|14193330|gb|AAK55908.1|AF267217_2 (AF267217) ATP synthase gam...   180 2e-44
         gi|14193346|gb|AAK55920.1|AF267221_2 (AF267221) ATP synthase gam...   180 3e-44
         gi|14193362|gb|AAK55932.1|AF267226_2 (AF267226) ATP synthase gam...   179 5e-44
         gi|14193266|gb|AAK55860.1|AF267201_2 (AF267201) ATP synthase gam...   177 2e-43
         gi|1703749|sp|P50007|ATPG_STRLI ATP SYNTHASE GAMMA CHAIN >gi|480...   176 4e-43
         gi|14193342|gb|AAK55917.1|AF267220_2 (AF267220) ATP synthase gam...   176 6e-43
         gi|14193322|gb|AAK55902.1|AF267215_2 (AF267215) ATP synthase gam...   175 1e-42
         gi|14193254|gb|AAK55851.1|AF267198_2 (AF267198) ATP synthase gam...   174 1e-42
         gi|7436155|pir||A70475 H+-transporting ATP synthase (EC 3.6.1.34...   174 1e-42
         gi|9964609|ref|NP_064739.1| gp2 [Roseophage SIO1] >gi|9944300|gb...   173 2e-42
         gi|13473457|ref|NP_105024.1| ATP synthase gamma subunit [Mesorhi...   172 8e-42
         gi|14193298|gb|AAK55884.1|AF267209_2 (AF267209) ATP synthase gam...   170 2e-41
         gi|14193318|gb|AAK55899.1|AF267214_2 (AF267214) ATP synthase gam...   169 6e-41
         gi|14193306|gb|AAK55890.1|AF267211_2 (AF267211) ATP synthase gam...   167 2e-40
         gi|4323567|gb|AAD16425.1| (AF101055) ATP synthase subunit gamma ...   165 1e-39
         gi|6652832|gb|AAF22497.1|AF098522_7 (AF098522) F1F0-ATPase subun...   162 8e-39
         gi|11266808|pir||B81427 H+-transporting ATP synthase (EC 3.6.1.3...   161 1e-38
         gi|14193274|gb|AAK55866.1|AF267203_2 (AF267203) ATP synthase gam...   161 1e-38
         gi|7490136|pir||T39660 ATP synthase gamma chain precursor, mitoc...   161 2e-38
         gi|14089680|emb|CAC13440.1| (AL445563) ATP SYNTHASE GAMMA CHAIN ...   160 4e-38
         gi|1352043|sp|P49377|ATPG_KLULA ATP SYNTHASE GAMMA CHAIN, MITOCH...   159 5e-38
         gi|14193262|gb|AAK55857.1|AF267200_2 (AF267200) ATP synthase gam...   157 2e-37
         gi|12045262|ref|NP_073073.1| ATP synthase F1, subunit gamma (atp...   157 3e-37
         gi|14193270|gb|AAK55863.1|AF267202_2 (AF267202) ATP synthase gam...   157 3e-37
         gi|461581|sp|P33257|ATPG_MYCGA ATP SYNTHASE GAMMA CHAIN >gi|2825...   157 3e-37
         gi|14193326|gb|AAK55905.1|AF267216_2 (AF267216) ATP synthase gam...   156 4e-37
         gi|5915732|sp|O50289|ATPG_RICPR ATP SYNTHASE GAMMA CHAIN >gi|743...   152 7e-36
         gi|7436162|pir||E72231 ATP synthase F1, subunit gamma - Thermoto...   152 9e-36
         gi|6319513|ref|NP_009595.1| gamma subunit of mitochondrial ATP s...   150 3e-35
         gi|14193302|gb|AAK55887.1|AF267210_2 (AF267210) ATP synthase gam...   150 4e-35
         gi|14028611|gb|AAK52430.1|AF280099_2 (AF280099) ATP synthase gam...   148 9e-35
         gi|9630534|ref|NP_046964.1| large terminase subunit [Methanobact...   148 9e-35
         gi|13508338|ref|NP_110288.1| ATP synthase gamma chain [Mycoplasm...   148 2e-34
         gi|13357687|ref|NP_077961.1| ATP synthase gamma chain [Ureaplasm...   144 2e-33
         gi|11863101|ref|NP_071818.1| putative large terminase subunit [M...   144 2e-33
         gi|14193310|gb|AAK55893.1|AF267212_2 (AF267212) ATP synthase gam...   143 3e-33
         gi|14193286|gb|AAK55875.1|AF267206_2 (AF267206) ATP synthase gam...   141 2e-32
         gi|14193350|gb|AAK55923.1|AF267223_2 (AF267223) ATP synthase gam...   139 4e-32
         gi|5811567|dbj|BAA83612.1| (AB022018) F1F0-ATPase gamma subunit ...   137 2e-31
         gi|11466190|ref|NP_066513.1| ATP synthase F1 subunit gamma [Naeg...   134 2e-30
         gi|14193358|gb|AAK55929.1|AF267225_2 (AF267225) ATP synthase gam...   133 6e-30
         gi|14193354|gb|AAK55926.1|AF267224_2 (AF267224) ATP synthase gam...   131 1e-29
         gi|11292678|pir||H82649 hypothetical protein XF1674 XF1569 [impo...   131 1e-29
         gi|14193282|gb|AAK55872.1|AF267205_2 (AF267205) ATP synthase gam...   127 2e-28
         gi|7530124|emb|CAB86705.1| (AL163505) hypothetical protein L3640...   121 1e-26
         gi|13645054|ref|XP_005846.3| ATP synthase, H+ transporting, mito...   116 3e-25
         gi|14028607|gb|AAK52427.1|AF280098_2 (AF280098) ATP synthase gam...   114 1e-24
         gi|14193258|gb|AAK55854.1|AF267199_2 (AF267199) ATP synthase gam...   112 6e-24
         gi|2058301|emb|CAA73233.1| (Y12701) ATP synthase, gamma subunit ...   106 4e-22
         gi|6467533|gb|AAF13179.1|AF181080_1 (AF181080) putative large te...   106 4e-22
         gi|7436157|pir||T06998 probable H+-transporting ATP synthase (EC...   103 6e-21
         gi|11292672|pir||A82650 phage-related protein XF1675 XF1570 [imp...   101 2e-20
         gi|599905|emb|CAA39064.1| (X55389) mitochondrial F1-ATPase gamma...    97 4e-19
         gi|7514282|pir||A70319 ATP synthase F1 gamma subunit - Aquifex a...    95 1e-18
         gi|9964608|ref|NP_064738.1| gp1 [Roseophage SIO1] >gi|9944299|gb...    93 4e-18
         gi|13476623|ref|NP_108193.1| hypothetical protein [Mesorhizobium...    93 6e-18
         gi|3249698|gb|AAC24136.1| (AF071201) unknown [bacteriophage Feli...    90 4e-17
         gi|2605828|gb|AAC38058.1| (AF028006) ATP synthase gamma subunit ...    87 3e-16
         gi|13424390|gb|AAK24754.1| (AE005944) conserved hypothetical pro...    84 3e-15
         gi|403966|gb|AAB01015.1| (U01703) Homology to Swiss-Prot Accessi...    76 7e-13
         gi|14089916|emb|CAC13675.1| (AL445564) unknown; predicted coding...    68 2e-10
         gi|6478836|dbj|BAA87181.1| (AB027877) ATP synthase gamma chain [...    63 6e-09
         gi|1304066|dbj|BAA12666.1| (D84449) proton ATPase gamma subunit ...    57 4e-07
         gi|4633071|gb|AAD26614.1|AF073726_1 (AF073726) F1-ATP synthase g...    46 8e-04
         gi|4102866|gb|AAD01607.1| (AF017097) F1-ATPase gamma-subunit [Pa...    46 9e-04

Pfam information on sequence:

THE PFAM SITE REPORTED NO FINDINGS.

Smith and Waterman information on sequence:

RANK SCORES QF TARGET LOCUS NAME ACCESSION# TF TARGET P_SCORE DESCRIPTION

   1    681.00 1 SWALL:Q9G0I1                                 1 sptr      1.1e-084 Q9G0I1 GP4.
   2    429.00 1 SWALL:Q9G0I4                                 1 sptr      6.7e-050 Q9G0I4 GP2.
   3    253.00 1 SWALL:Q9G0I5                                 1 sptr      1.4e-025 Q9G0I5 GP1.
   4    103.00 1 SWALL:VDMB_BPT3                              1 sptr      0.000071 P10310 DNA MATURASE B DNA PACKAGING PROTEIN B) (GP1
   5     98.00 1 SWALL:Q9T0Z4                                 1 sptr      0.000347 Q9T0Z4 DNA PACKAGING PROTEIN B.
   6     95.00 1 SWALL:VDMB_BPT7                              1 sptr      0.000900 P03694 DNA MATURASE B (DNA PACKAGING
   7     75.00 1 SWALL:Q9K740                                 1 sptr      0.405909 Q9K740 BH3533 PROTEIN.
   8     72.00 1 SWALL:Q9SV85                                 1 sptr      0.741235 Q9SV85 HYPOTHETICAL 81.4 KDA PROTEIN
   9     72.00 1 SWALL:Q9M0N5                                 1 sptr      0.741235 Q9M0N5 HYPOTHETICAL 78.2 KDA PROTEIN.
10     70.00 1 SWALL:SFUA_SERMA                             1 sptr      0.922190 P21408 IRON(III)-BINDING PERIPLASMIC
11     70.00 1 SWALL:WNT4_BRARE                             1 sptr      0.922190 P47793 WNT-4 PROTEIN PRECURSOR.
12     70.00 1 SWALL:Q9XYX4                                 1 sptr      0.922190 Q9XYX4 RECEPTOR PROTEIN-TYROSINEKINASE
13     70.00 1 SWALL:O80199                                 1 sptr      0.922190 O80199 LARGE TERMINASE SUBUNIT.
14     70.00 1 SWALL:Q55715                                 1 sptr      0.922190 Q55715 HYPOTHETICAL 29.0 KDA PROTEIN.
15     70.00 1 SWALL:Q9P9N6                                 1 sptr      0.922190 Q9P9N6 PHAGE-RELATED PROTEIN.
16     68.00 1 SWALL:Q9X218                                 1 sptr      0.991960 Q9X218 AMINOTRANSFERASE, CLASS V.
17     68.00 1 SWALL:O28814                                 1 sptr      0.991960 O28814 ATP-DEPENDENT RNA HELICASE, PUTATIVE.
18     67.00 1 SWALL:HSCA_BUCAI                             1 sptr      0.998679 P57660 CHAPERONE PROTEIN HSCA HOMOLOG.
19     67.00 1 SWALL:Q08996                                 1 sptr      0.998679 Q08996 CBP2 PROTEIN.
20     67.00 1 SWALL:Q9P9T5                                 1 sptr      0.998679 Q9P9T5 HYPOTHETICAL PROTEIN XF1674.
21     66.00 1 SWALL:CIN1_HUMAN                             1 sptr      0.999890 P35498 SODIUM CHANNEL PROTEIN, BRAIN I ALPHA SUBUNIT
22     66.00 1 SWALL:WNT4_HUMAN                             1 sptr      0.999890 P56705 WNT-4 PROTEIN (FRAGMENT).
23     66.00 1 SWALL:WNT4_MOUSE                             1 sptr      0.999890 P22724 WNT-4 PROTEIN PRECURSOR.
24     66.00 1 SWALL:WNT4_RAT                               1 sptr      0.999890 Q9QXQ5 WNT-4 PROTEIN PRECURSOR.
25     66.00 1 SWALL:O95373                                 1 sptr      0.999890 O95373 RANBP7/IMPORTIN 7.
26     66.00 1 SWALL:Q9H1J8                                 1 sptr      0.999890 Q9H1J8 WNT4 PRECURSOR.
27     66.00 1 SWALL:Q9H177                                 1 sptr      0.999890 Q9H177 IMPORTIN7 (FRAGMENT).
28     66.00 1 SWALL:Q9EPL8                                 1 sptr      0.999890 Q9EPL8 RANBP7/IMPORTIN 7.
29     66.00 1 SWALL:Q9HH54                                1 sptr      0.999890 Q9HH54 PUTATIVE LARGE TERMINASE SUBUNIT.
30     66.00 1 SWALL:AAG53385                               1 sptr      0.999890 AAG53385 GP45 (FRAGMENT).
31     66.00 1 SWALL:AAK00217                               1 sptr      0.999890 AAK00217 VOLTAGE-GATED SODIUM CHANNEL ALPHA SUBUNIT
32     65.00 1 SWALL:CIN1_RAT                               1 sptr      0.999996 P04774 SODIUM CHANNEL PROTEIN, BRAIN I ALPHA SUBUNIT
33     65.00 1 SWALL:WNT4_CHICK                             1 sptr      0.999996 P49337 WNT-4 PROTEIN PRECURSOR.
34     65.00 1 SWALL:WNT4_CHECA                             1 sptr      0.999996 P28108 WNT-4 PROTEIN (FRAGMENT).
35     65.00 1 SWALL:WNT4_MELGA                             1 sptr      0.999996 P28127 WNT-4 PROTEIN (FRAGMENT).
36     65.00 1 SWALL:P90922                                 1 sptr      0.999996 P90922 K07A12.4 PROTEIN.
37     65.00 1 SWALL:Q9FMQ5                                 1 sptr      0.999996 Q9FMQ5 GB|AAF31728.1.
38     65.00 1 SWALL:Q62768                                 1 sptr      0.999996 Q62768 MUNC13-1.
39     65.00 1 SWALL:O42116                                 1 sptr      0.999996 O42116 WNT-4 PROTEIN (FRAGMENT).
40     65.00 1 SWALL:Q9PS89                                 1 sptr      0.999996 Q9PS89 WNT-4 PROTEIN (FRAGMENT).
41     65.00 1 SWALL:AAG53155                               1 sptr      0.999996 AAG53155 GP45 (FRAGMENT).
42     65.00 1 SWALL:AAG53161                               1 sptr      0.999996 AAG53161 GP45 (FRAGMENT).
43     65.00 1 SWALL:AAG53211                               1 sptr      0.999996 AAG53211 GP45 (FRAGMENT).
44     64.00 1 SWALL:Q26607                                 1 sptr      1.000000 Q26607 SURFACE PROTEIN (FRAGMENT).
45     64.00 1 SWALL:O76579                                 1 sptr      1.000000 O76579 C16A11.5 PROTEIN.
46     64.00 1 SWALL:Q22655                                 1 sptr      1.000000 Q22655 T21E8.2 PROTEIN.
47     64.00 1 SWALL:Q22656                                 1 sptr      1.000000 Q22656 T21E8.1 PROTEIN.
48     64.00 1 SWALL:P87609                                 1 sptr      1.000000 P87609 41KBP FRAGMENT FROM LEFT END OF GENOME.
49     64.00 1 SWALL:O42480                                 1 sptr      1.000000 O42480 RANBP7.
50     64.00 1 SWALL:AAG53121                               1 sptr      1.000000 AAG53121 GP45 (FRAGMENT).

[BEGIN ALIGNMENTS TIME] Tue Jul 10 21:41:32 2001

[ALIGNMENTS]

_________________________________________________________________________

RANK    1 Score = 681.00 P_Score = 1.1e-084
Q = SOC_oban_63526790.seq            QF = 1 #Q Symbols = 535
T = SWALL:Q9G0I1                     TF = 1 #T Symbols = 353
A =
D = Q9G0I1 GP4.
Identical Match = 141 Similar = 201 Total # Of Gaps = 5
Identity: Alignment = 43% Query = 26% Target = 40%
Similarity: Alignment = 62% Query = 38% Target = 57%
QS =     174 QE =     492 TS =       2 TE =     324

Q     174 HCNIMVKDDVVIDKNSLTETARQKVEAKAGHLSSILTTDGMEFCVGTRYHPKDHYQTLID
          ||.| | ||||. .|. |   | ||...   |||| .. |. ||||||||| | |.
T       2 HCDIAVLDDVVVFENAYTNEGRNKVKSQYSLLSSIEGSEAQEWVVGTRYHPKDLYSDLMG

Q     234 MTEEVWEGD-QLVGERPVYAVHTRVVEVE----GVFLWPRMARESDGKMFGFDRAQLSRK
          | |... . .|||. .| | . ||      | ||||| |. ||| ||||   |..|
T      62 MEEDIYSKEGELVGKENIYEVMEKAVEDNGDGTGEFLWPRQLRK-DGKFFGFDVQILAKK

Q     289 KAKYRKDMRNFYCQYYNDPNAINEGGIEKSMFLYYDKEKVVRRKGSWWVGKRKVNIIACQ
          . .| |   | ||||||   .   |    | ||||. . | | |.   .|.|. |
T     121 RGQY-LDRVQFRAQYYNDPTDPDSQPIAYEKFQYYDKKHLTRDGGQWFYKGQKLNVSAAV

Q     349 DFAYSVQTGSDWTALFILGMDKDKRIYILDIVRYQTKKPSVYWKNLETAYNKWKFRWVRA
          ||||||   .|.||. ..|.| . .|.||| |..| | | |....    |.| || .||
T     180 DFAYSVSKRADYTAIVVIGVDSENNVYVLDIDRFKTDKISEYFRHILDLLNRWDFRKLRA

Q     409 EAVAAQEVIIEALRE-YAEKEQCPIRIKAYKPNSQSGDKETRISQTLEPLYENGDIYHYR
          | ||| |. |.. | .     ..| ..||   | || ||. ||| |.| .||||
T     240 ECTAAQSAIVSELKDNYIKPNGLALKIDEHRPNRHQGSKEERIAAILEPRYDNLQMYHYR

Q     468 GGLCDMLEEELTQDRPPHDDLKDCL
          || | .|||||    | ||| ||||
T     300 GGNCQVLEEELVSYNPAHDDCKDCL
_________________________________________________________________________

RANK    2 Score = 429.00 P_Score = 6.7e-050
Q = SOC_oban_63526790.seq            QF = 1 #Q Symbols = 535
T = SWALL:Q9G0I4                     TF = 1 #T Symbols = 247
A =
D = Q9G0I4 GP2.
Identical Match = 82 Similar = 118 Total # Of Gaps = 1
Identity: Alignment = 42% Query = 15% Target = 33%
Similarity: Alignment = 61% Query = 22% Target = 48%
QS =     305 QE =     496 TS =      24 TE =     216

Q     305 NDPNAINEGGIEKSMFLYYDKEKVVRRKGSWWVGKRKVNIIACQDFAYSVQTGSDWTALF
          |||   .   |    | ||||. . | | |.   .|.|. | ||||||   .|.||.
T      24 NDPTDPDSQPIAYEKFQYYDKKHLTRDGGQWFYKGQKLNVSAAVDFAYSVSKRADYTAIV

Q     365 ILGMDKDKRIYILDIVRYQTKKPSVYWKNLETAYNKWKFRWVRAEAVAAQEVIIEALRE-
          ..|.| . .|.||| |..| | | |....    |.| || .||| ||| |. |..
T      84 VIGVDSENNVYVLDIDRFKTDKISEYFRHILDLLNRWDFRKLRAECTAAQSAIVSELKDN

Q     424 YAEKEQCPIRIKAYKPNSQSGDKETRISQTLEPLYENGDIYHYRGGLCDMLEEELTQDRP
          | .     ..| ..||   | || ||. ||| |.| .|||||| | .|||||    |
T     144 YIKPNGLALKIDEHRPNRHQGSKEERIAAILEPRYDNLQMYHYRGGNCQVLEEELVSYNP

Q     484 PHDDLKDCLHIGV
           ||| ||||   |
T     204 AHDDCKDCLAAAV
_________________________________________________________________________

RANK    3 Score = 253.00 P_Score = 1.4e-025
Q = SOC_oban_63526790.seq            QF = 1 #Q Symbols = 535
T = SWALL:Q9G0I5                     TF = 1 #T Symbols = 136
A =
D = Q9G0I5 GP1.
Identical Match = 60 Similar = 84 Total # Of Gaps = 4
Identity: Alignment = 44% Query = 11% Target = 44%
Similarity: Alignment = 62% Query = 16% Target = 62%
QS =     174 QE =     304 TS =       2 TE =     135

Q     289 KAKYRKDMRNFYCQYY
          . .| |   | |||
T     121 RGQY-LDRVQFRAQYY
_________________________________________________________________________

RANK    4 Score = 103.00 P_Score = 0.000071
Q = SOC_oban_63526790.seq            QF = 1 #Q Symbols = 535
T = SWALL:VDMB_BPT3                  TF = 1 #T Symbols = 586
A =
D = P10310 DNA MATURASE B (DNA PACKAGING PROTEIN B) (GP19).
Identical Match = 29 Similar = 59 Total # Of Gaps = 1
Identity: Alignment = 23% Query = 5% Target = 5%
Similarity: Alignment = 48% Query = 11% Target = 10%
QS =      75 QE =     198 TS =      64 TE =     177

Q      75 KSHCIAVWVCWQIFKNPAVTIAYVCATESLAILQLYDIKQILTSDEFTRLSPDMIEPMEK
          ||     .| | ....| . | | |.. | |    || |.          |.. ...
T      64 KSFITCAFVVWTLWRDPQLKILIVSASKERADLNSIFIKNII----------DLLPFLDE

Q     135 KRQKWAETAIIVDHPIRKKERPRDPTVLATGLDSNNIGAHCNIMVKDDVVIDKNSLTETA
           .    .   ..   .   .    |.| . |.     |. .|.. ||| | || |. |
T     114 LKPSPGQRDSVISFDVGPAKPDHSPSVKSVGITGQLTGSRADIIIADDVEIPSNSATQGA

Q     195 RQKV
          |.|.
T     174 REKL
_________________________________________________________________________

RANK    5 Score = 98.00 P_Score = 0.000347
Q = SOC_oban_63526790.seq            QF = 1 #Q Symbols = 535
T = SWALL:Q9T0Z4                     TF = 1 #T Symbols = 587
A =
D = Q9T0Z4 DNA PACKAGING PROTEIN B.
Identical Match = 29 Similar = 62 Total # Of Gaps = 1
Identity: Alignment = 21% Query = 5% Target = 5%
Similarity: Alignment = 46% Query = 12% Target = 11%
QS =      75 QE =     209 TS =      65 TE =     189

Q      75 KSHCIAVWVCWQIFKNPAVTIAYVCATESLAILQLYDIKQILTSDEFTRLSPDMIEPMEK
          ||     .| | ....| . | | |.. |      || |.          |.. . .
T      65 KSFITCAFVVWTLWRDPQLKILIVSASKERADANSIFIKNII----------DLLPFLAE

Q     135 KRQKWAETAIIVDHPIRKKERPRDPTVLATGLDSNNIGAHCNIMVKDDVVIDKNSLTETA
           . . .   ..   .   .    |.| . |.     |. .|.. ||| | || |. |
T     115 LKPRPGQRDSVISFDVGPAKPDHSPSVKSVGITGQLTGSRADIIIADDVEIPSNSATQGA

Q     195 RQKVEAKAGHLSSIL
          |.|.       ...|
T     175 REKLWTLVQEFAALL
_________________________________________________________________________

RANK    6 Score = 95.00 P_Score = 0.000900
Q = SOC_oban_63526790.seq            QF = 1 #Q Symbols = 535
T = SWALL:VDMB_BPT7                  TF = 1 #T Symbols = 586
A =
D = P03694 DNA MATURASE B (DNA PACKAGING PROTEIN B) (GP19).
Identical Match = 29 Similar = 60 Total # Of Gaps = 1
Identity: Alignment = 21% Query = 5% Target = 5%
Similarity: Alignment = 44% Query = 11% Target = 10%
QS =      75 QE =     209 TS =      64 TE =     188

Q      75 KSHCIAVWVCWQIFKNPAVTIAYVCATESLAILQLYDIKQILTSDEFTRLSPDMIEPMEK
          ||     .| | ....| . | | |.. |      || |.          |.. . .
T      64 KSFITCAFVVWSLWRDPQLKILIVSASKERADANSIFIKNII----------DLLPFLSE

Q     135 KRQKWAETAIIVDHPIRKKERPRDPTVLATGLDSNNIGAHCNIMVKDDVVIDKNSLTETA
           . . .   ..   .        |.| . |.     |. .|.. ||| | || | |
T     114 LKPRPGQRDSVISFDVGPANPDHSPSVKSVGITGQLTGSRADIIIADDVEIPSNSATMGA

Q     195 RQKVEAKAGHLSSIL
          |.|.       ...|
T     174 REKLWTLVQEFAALL
_________________________________________________________________________

RANK    7 Score = 75.00 P_Score = 0.405909
Q = SOC_oban_63526790.seq            QF = 1 #Q Symbols = 535
T = SWALL:Q9K740                     TF = 1 #T Symbols = 468
A =
D = Q9K740 BH3533 PROTEIN.
Identical Match = 17 Similar = 24 Total # Of Gaps = 1
Identity: Alignment = 38% Query = 3% Target = 4%
Similarity: Alignment = 53% Query = 4% Target = 5%
QS =     343 QE =     387 TS =     296 TE =     338

Q     343 NIIACQDFAYSVQTGSDWTALFILGMDKDKRIYILDIVRYQTKKP
          |..    . . || |. | ||    ||| |||| .   ||.|
T     296 NVVRIASYTDTADTGGDYLASFIYAETKDKEAYILDAI--YTKEP
_________________________________________________________________________

RANK    8 Score = 72.00 P_Score = 0.741235
Q = SOC_oban_63526790.seq            QF = 1 #Q Symbols = 535
T = SWALL:Q9SV85                     TF = 1 #T Symbols = 705
A =
D = Q9SV85 HYPOTHETICAL 81.4 KDA PROTEIN (FRAGMENT).
Identical Match = 20 Similar = 25 Total # Of Gaps = 0
Identity: Alignment = 36% Query = 4% Target = 3%
Similarity: Alignment = 45% Query = 5% Target = 4%
QS =     481 QE =     535 TS =      61 TE =     115

Q     481 DRPPHDDLKDCLHIGVGFDKLKPPAEDDDEEDYDNYHDPHASYSYDPNNRFGGLQ
          |.|    | |    . | |||   || | |||    |. | . |. | | |
T      61 DQPLDQPLFLCPDARIKFHKLKIQREDGDIFDYDFKFHPYISSPHFPSKRSGDQQ
_________________________________________________________________________

RANK    9 Score = 72.00 P_Score = 0.741235
Q = SOC_oban_63526790.seq            QF = 1 #Q Symbols = 535
T = SWALL:Q9M0N5                     TF = 1 #T Symbols = 676
A =
D = Q9M0N5 HYPOTHETICAL 78.2 KDA PROTEIN.
Identical Match = 20 Similar = 25 Total # Of Gaps = 0
Identity: Alignment = 36% Query = 4% Target = 3%
Similarity: Alignment = 45% Query = 5% Target = 4%
QS =     481 QE =     535 TS =      32 TE =      86

Q     481 DRPPHDDLKDCLHIGVGFDKLKPPAEDDDEEDYDNYHDPHASYSYDPNNRFGGLQ
          |.|    | |    . | |||   || | |||    |. | . |. | | |
T      32 DQPLDQPLFLCPDARIKFHKLKIQREDGDIFDYDFKFHPYISSPHFPSKRSGDQQ
_________________________________________________________________________

RANK   10 Score = 70.00 P_Score = 0.922190
Q = SOC_oban_63526790.seq            QF = 1 #Q Symbols = 535
T = SWALL:SFUA_SERMA                 TF = 1 #T Symbols = 338
A =
D = P21408 IRON(III)-BINDING PERIPLASMIC PROTEIN PRECURSOR.
Identical Match = 20 Similar = 36 Total # Of Gaps = 1
Identity: Alignment = 27% Query = 4% Target = 6%
Similarity: Alignment = 49% Query = 7% Target = 11%
QS =     394 QE =     466 TS =     151 TE =     224

Q     394 LETAYNKWKFRWVRAEAVAAQEVIIEALREYAEKEQCPIRIKAYKPNSQSGDKETRISQT
          |. | .|| || . . | . |. || |   ..     .|| | | .    . . .
T     151 LDLAKPEWKGRWAASPSGADFQAIVSALLELKGEKATLAWLKAMKTNFTAYKGNSTVMKA

Q     454 LEP-LYENGDIYHY
          .     ..| ||||
T     211 VNAGQVDSGVIYHY
_________________________________________________________________________

RANK   11 Score = 70.00 P_Score = 0.922190
Q = SOC_oban_63526790.seq            QF = 1 #Q Symbols = 535
T = SWALL:WNT4_BRARE                 TF = 1 #T Symbols = 352
A =
D = P47793 WNT-4 PROTEIN PRECURSOR.
Identical Match = 17 Similar = 23 Total # Of Gaps = 0
Identity: Alignment = 42% Query = 3% Target = 5%
Similarity: Alignment = 57% Query = 4% Target = 7%
QS =      35 QE =      74 TS =     222 TE =     261

Q      35 QAVEPHRVYGECHKELFDWWQEMELEEVLNTLALMPRDHQ
          .|. | | |   || ||   |.|| .| | |.||. |
T     222 KAMPPFRKVGNVIKEKFDGATEVELRKVGTTKVLVPRNSQ
_________________________________________________________________________

RANK   12 Score = 70.00 P_Score = 0.922190
Q = SOC_oban_63526790.seq            QF = 1 #Q Symbols = 535
T = SWALL:Q9XYX4                     TF = 1 #T Symbols = 134
A =
D = Q9XYX4 RECEPTOR PROTEIN-TYROSINE KINASE (FRAGMENT).
Identical Match = 12 Similar = 22 Total # Of Gaps = 0
Identity: Alignment = 31% Query = 2% Target = 9%
Similarity: Alignment = 56% Query = 4% Target = 16%
QS =     368 QE =     406 TS =      47 TE =      85

Q     368 MDKDKRIYILDIVRYQTKKPSVYWKNLETAYNKWKFRWV
          ||. . |.| . .. ..|   ||     ||| .| |.
T      47 MDQAENIFITNTLKDDSRKKDNYWIGFNDAYNNREFLWL
_________________________________________________________________________

RANK   13 Score = 70.00 P_Score = 0.922190
Q = SOC_oban_63526790.seq            QF = 1 #Q Symbols = 535
T = SWALL:O80199                     TF = 1 #T Symbols = 468
A =
D = O80199 LARGE TERMINASE SUBUNIT.
Identical Match = 15 Similar = 23 Total # Of Gaps = 0
Identity: Alignment = 38% Query = 3% Target = 3%
Similarity: Alignment = 59% Query = 4% Target = 5%
QS =     359 QE =     397 TS =     309 TE =     347

Q     359 DWTALFILGMDKDKRIYILDIVRYQTKKPSVYWKNLETA
          |.|   .||.||.   |.||. |..     | | | ||
T     309 DYTVGLLLGVDKEDYYYVLDVRRFRESPGKVKSKVLRTA
_________________________________________________________________________

RANK   14 Score = 70.00 P_Score = 0.922190
Q = SOC_oban_63526790.seq            QF = 1 #Q Symbols = 535
T = SWALL:Q55715                     TF = 1 #T Symbols = 261
A =
D = Q55715 HYPOTHETICAL 29.0 KDA PROTEIN.
Identical Match = 16 Similar = 20 Total # Of Gaps = 0
Identity: Alignment = 39% Query = 3% Target = 6%
Similarity: Alignment = 49% Query = 4% Target = 8%
QS =     110 QE =     150 TS =     115 TE =     155

Q     110 YDIKQILTSDEFTRLSPDMIEPMEKKRQKWAETAIIVDHPI
          | |      | |    |.. ||    || | || .||||.
T     115 YFISSSTLGDIFDDSEPELEEPAPSSRQLAATTAPVVDHPL
_________________________________________________________________________

RANK   15 Score = 70.00 P_Score = 0.922190
Q = SOC_oban_63526790.seq            QF = 1 #Q Symbols = 535
T = SWALL:Q9P9N6                     TF = 1 #T Symbols = 183
A =
D = Q9P9N6 PHAGE-RELATED PROTEIN.
Identical Match = 13 Similar = 25 Total # Of Gaps = 0
Identity: Alignment = 32% Query = 2% Target = 7%
Similarity: Alignment = 61% Query = 5% Target = 14%
QS =     349 QE =     389 TS =      13 TE =      53

Q     349 DFAYSVQTGSDWTALFILGMDKDKRIYILDIVRYQTKKPSV
          | |      .|..   . |. .|||||.||..| . . | .
T      13 DTAQKTAERNDYSVFQLWGLGEDKRIYLLDMIRGKWEAPEL
_________________________________________________________________________

RANK   16 Score = 68.00 P_Score = 0.991960
Q = SOC_oban_63526790.seq            QF = 1 #Q Symbols = 535
T = SWALL:Q9X218                     TF = 1 #T Symbols = 384
A =
D = Q9X218 AMINOTRANSFERASE, CLASS V.
Identical Match = 16 Similar = 29 Total # Of Gaps = 0
Identity: Alignment = 30% Query = 3% Target = 4%
Similarity: Alignment = 54% Query = 5% Target = 8%
QS =     280 QE =     333 TS =       5 TE =      58

Q     280 FDRAQLSRKKAKYRKDMRNFYCQYYNDPNAINEGGIEKSMFLYYDKEKVVRRKG
          ||    .|   . ..| || . | .||. . ||| .. .   .||| . |
T       5 FDNNATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLG
_________________________________________________________________________

RANK   17 Score = 68.00 P_Score = 0.991960
Q = SOC_oban_63526790.seq            QF = 1 #Q Symbols = 535
T = SWALL:O28814                     TF = 1 #T Symbols = 741
A =
D = O28814 ATP-DEPENDENT RNA HELICASE, PUTATIVE.
Identical Match = 21 Similar = 43 Total # Of Gaps = 2
Identity: Alignment = 24% Query = 4% Target = 3%
Similarity: Alignment = 50% Query = 8% Target = 6%
QS =      64 QE =     149 TS =      31 TE =     113

Q      64 NTLALMPRDHQKSHCIAVWVCWQIFKNPAVTIAYVCATESLAILQLYDIKQILTSDEFTR
          ||| ..|    |.   |. . .. |    . .. |. |       .|..| .|
T      31 NTLVVIPTGLGKTTIAALVIASRLL-NEDGKVLFLAPTKPLVEQHARFLKRVLKVEEIVS

Q     124 LSPDMIEPMEKKRQKWAETAIIVDHP
          || .. | ||... | . |.| |
T      90 LSGEV--PPEKRKELWEKARIVVSTP
_________________________________________________________________________

RANK   18 Score = 67.00 P_Score = 0.998679
Q = SOC_oban_63526790.seq            QF = 1 #Q Symbols = 535
T = SWALL:HSCA_BUCAI                 TF = 1 #T Symbols = 611
A =
D = P57660 CHAPERONE PROTEIN HSCA HOMOLOG.
Identical Match = 15 Similar = 19 Total # Of Gaps = 0
Identity: Alignment = 48% Query = 3% Target = 2%
Similarity: Alignment = 61% Query = 4% Target = 3%
QS =     365 QE =     395 TS =      34 TE =      64

Q     365 ILGMDKDKRIYILDIVRYQTKKPSVYWKNLE
          || .|| || . .| |. | || || ||
T      34 ILLLDKKKRYLLPSVVHYKKNKISVGWKALE
_________________________________________________________________________

RANK   19 Score = 67.00 P_Score = 0.998679
Q = SOC_oban_63526790.seq            QF = 1 #Q Symbols = 535
T = SWALL:Q08996                     TF = 1 #T Symbols = 630
A =
D = Q08996 CBP2 PROTEIN.
Identical Match = 23 Similar = 34 Total # Of Gaps = 2
Identity: Alignment = 31% Query = 4% Target = 4%
Similarity: Alignment = 45% Query = 6% Target = 5%
QS =      84 QE =     150 TS =      38 TE =     112

Q      84 CWQIFKNPAVTIAYVCATESLAILQLYDIKQILTSD-------EFTRLSPDMIEPMEKKR
          | | ||   .. |      |    | |....| |        | . |..|   |||
T      38 CKQAFKKANLSYEYCDLEGKLYNASLMDLQKMLLRDINAPRDHVFKIVRTDLVEKSSKKR

Q     137 -QKWAETAIIVDHPI
           | | . | | |||.
T      98 IQHWEQIAPIFDHPL
_________________________________________________________________________

RANK   20 Score = 67.00 P_Score = 0.998679
Q = SOC_oban_63526790.seq            QF = 1 #Q Symbols = 535
T = SWALL:Q9P9T5                     TF = 1 #T Symbols = 316
A =
D = Q9P9T5 HYPOTHETICAL PROTEIN XF1674.
Identical Match = 14 Similar = 26 Total # Of Gaps = 0
Identity: Alignment = 28% Query = 3% Target = 4%
Similarity: Alignment = 52% Query = 5% Target = 8%
QS =      90 QE =     139 TS =      88 TE =     137

Q      90 NPAVTIAYVCATESLAILQLYDIKQILTSDEFTRLSPDMIEPMEKKRQKW
          ||     .. .. ||.|     ..|. |||. | | |    | ...|
T      88 NPYARFLHISYSDDLALLNSETAREIVQSDEYRALWPLEIADDAKSKKRW

[END ALIGNMENTS TIME] Tue Jul 10 21:41:32 2001

T7 Maturase Blast:

Sequences with E-value BETTER than threshold

Score E
Sequences producing significant alignments: (bits) Value

         gi|137614|sp|P10310|VDMB_BPT3 DNA MATURASE B (DNA PACKAGING PROT... 1183 0.0
         gi|9627482|ref|NP_042010.1| gene 19, DNA maturation protein [Bac... 1177 0.0
         gi|9634048|ref|NP_052122.1| DNA packaging protein B [Bacteriopha... 1158 0.0

Sequences with E-value WORSE than threshold

         gi|7517637|pir||G70362 hypothetical protein aq_716 - Aquifex aeo...    35 1.4
         gi|4588602|gb|AAD26153.1| (AF111857) insulin receptor precursor ...    35 2.0
         gi|13470923|ref|NP_102492.1| probable acetyltransferase [Mesorhi...    35 2.6
         gi|127807|sp|P26831|NAGH_CLOPE HYALURONOGLUCOSAMINIDASE PRECURSO...    35 2.8
         gi|2984703|gb|AAC08007.1| (AF052427) unknown [Trypanosoma cruzi]       34 3.1
         gi|3135370|gb|AAC16490.1| (AF062496) insulin receptor a [Oncorhy...    33 7.6
         gi|11499739|ref|NP_070981.1| tRNA nucleotidyltransferase (cca) [...    33 8.2
         gi|9294197|dbj|BAB02099.1| (AB026655) membrane related protein-l...    33 8.9
         gi|12833006|dbj|BAB22349.1| (AK002775) putative [Mus musculus] >...    33     11
         gi|14625326|gb|AAK71409.1|AC006809_2 (AC006809) Hypothetical pro...    32     11
         gi|629258|pir||S44975 lmrC protein - Streptomyces lincolnensis >...    32     12
         gi|12667800|ref|NP_075361.1| associated with Prkcl1 [Mus musculu...    32     15
         gi|12844179|dbj|BAB26267.1| (AK009403) putative [Mus musculus]         32     16
         gi|4006905|emb|CAB16835.1| (Z99708) ATPase-like protein [Arabido...    32     16
         gi|4309734|gb|AAD15504.1| (AC006439) putative AAA-type ATPase [A...    31     25
         gi|7464615|pir||D71970 hypothetical protein jhp0137 - Helicobact...    31     26
         gi|7485064|pir||C71407 hypothetical protein - Arabidopsis thalia...    31     29
         gi|13471767|ref|NP_103334.1| hypothetical protein [Mesorhizobium...    31     31
         gi|10720364|sp|Q58863|YE68_METJA HYPOTHETICAL PROTEIN MJ1468 >gi...    31     32
         gi|13376095|ref|NP_079034.1| hypothetical protein FLJ23384 [Homo...    31     33
         gi|1170375|sp|P12076|HS71_LEIMA HEAT SHOCK 70-RELATED PROTEIN 1,...    31     34
         gi|10173597|dbj|BAB04701.1| (AP001510) BH0982~unknown conserved ...    31     35
         gi|13477245|gb|AAH05090.1|AAH05090 (BC005090) hypothetical prote...    31     35
         gi|1568613|gb|AAB09032.1| (U51329) nitrite reductase [Aspergillu...    31     35
         gi|13638702|ref|XP_015971.1| hypothetical protein FLJ23384 [Homo...    31     35
         gi|14041732|emb|CAC38403.1| (AJ308438) XptC1 protein [Xenorhabdu...    30     46
         gi|2493025|sp|P72247|ATPB_RHOCA ATP SYNTHASE BETA CHAIN >gi|1524...    30     46
         gi|7298451|gb|AAF53672.1| (AE003659) CG10275 gene product [Droso...    30     55
         gi|4503575|ref|NP_001968.1| glutamyl aminopeptidase (aminopeptid...    30     59
         gi|1082404|pir||A47531 glutamyl aminopeptidase (EC 3.4.11.7) - h...    30     59
         gi|6320376|ref|NP_010456.1| heat shock protein similar to HSP26,...    30     61
         gi|11288959|pir||T49373 hypothetical protein B1D1.270 [imported]...    30     61
         gi|8515860|gb|AAF76212.1|AF272053_2 (AF272053) HrpX [Erwinia her...    30     67
         gi|7433488|pir||H64670 ulcer associated adenine specific DNA met...    30     68
         gi|1705469|sp|P53554|BIOI_BACSU BIOTIN BIOSYNTHESIS; CYTOCHROME ...    30     72
         gi|7493969|pir||T03834 nuclear distribution protein RO11 - Neuro...    30     73
         gi|7302967|gb|AAF58038.1| (AE003807) CG15701 gene product [Droso...    30     76
         gi|13277237|emb|CAC34379.1| (AJ310086) adenylyltransferase [Cory...    30     84
         gi|3913820|sp|P95506|HEMN_PASHA OXYGEN-INDEPENDENT COPROPORPHYRI...    30     84
         gi|125943|sp|P22733|LACY_LACDE LACTOSE PERMEASE (LACTOSE-PROTON ...    30     87
         gi|3831467|gb|AAC69949.1| (AC005700) putative beta-amylase [Arab...    30     90
         gi|11360483|pir||G81702 adherence factor TC0437 [imported] - Chl...    30     91
         gi|6685430|sp|O84535|FMT_CHLTR METHIONYL-TRNA FORMYLTRANSFERASE ...    30     93
         gi|11354424|pir||E82133 ATP-dependent helicase, DinG family VC19...    30     93
         gi|2498194|sp|Q27957|BS25_BOVIN 25 KD BRAIN-SPECIFIC PROTEIN (P2...    30     93

Alignments

>gi|137614|sp|P10310|VDMB_BPT3 DNA MATURASE B (DNA PACKAGING PROTEIN B) (GP19)
gi|75971|pir||JVBPB3 DNA maturase B - phage T3
gi|215814|gb|AAA92528.1| (M14784) DNA-packaging protein B [Bacteriophage T3]
Length = 586

Score = 1183 bits (3062), Expect = 0.0
Identities = 496/586 (84%), Positives = 534/586 (90%)

Query: 1   MSTQSNRNALVVAQLKGDFVAFLFVLWKALNLPVPTKCQIDMAKVLANGDNKKFILQAFR 60
           MSTQSNRNALVVAQLKGDFVAFLFVLWKALNLPVPTKCQIDMAKVLANGDNKKFILQAFR
Sbjct: 1   MSTQSNRNALVVAQLKGDFVAFLFVLWKALNLPVPTKCQIDMAKVLANGDNKKFILQAFR 60

Query: 61 GIGKSFITCAFVVWSLWRDPQLKILIVSASKERADANSIFIKNIIDLLPFLSELKPRPGQ 120
GIGKSFITCAFVVW+LWRDPQLKILIVSASKERAD NSIFIKNIIDLLPFL ELKP PGQ
Sbjct: 61 GIGKSFITCAFVVWTLWRDPQLKILIVSASKERADLNSIFIKNIIDLLPFLDELKPSPGQ 120

Query: 121 RDSVISFDVGPANPDHSPSVKSVGITGQLTGSRADIIIADDVEIPSNSATMGAREKLWTL 180
RDSVISFDVGPA PDHSPSVKSVGITGQLTGSRADIIIADDVEIPSNSAT GAREKLWTL
Sbjct: 121 RDSVISFDVGPAKPDHSPSVKSVGITGQLTGSRADIIIADDVEIPSNSATQGAREKLWTL 180

Query: 181 VQEFAALLKPLPSSRVIYLGTPQTEMTLYKELEDNRGYTTIIWPALYPRTREENLYYSQR 240
VQEF ALLKPLP+SRVIYLGTPQTEMTLYKELEDNRGYTTIIWPALYPR+REE+LYY +R
Sbjct: 181 VQEFRALLKPLPTSRVIYLGTPQTEMTLYKELEDNRGYTTIIWPALYPRSREEDLYYGER 240

Query: 241 LAPMLRAEYDENPEALAGTPTDPVRFDRDDLRERELEYGKAGFTLQFMLNPNLSDAEKYP 300
LAPMLR E+++ E L G PTDPVRFD +DLRERELEYGKAGFTLQFMLNPNLSDAEKYP
Sbjct: 241 LAPMLREEFNDGFEMLQGQPTDPVRFDMEDLRERELEYGKAGFTLQFMLNPNLSDAEKYP 300

Query: 301 LRLRDAIVAALDLEKAPMHYQWLPNRQNIIEDLPNVGLKGDDLHTYHDCSNNSGQYQQKI 360
LRLRDAIV LD EKAPMHYQWLPNRQN E+LPNVGLKGDD+H+YH CS N+GQYQQ+I
Sbjct: 301 LRLRDAIVCGLDFEKAPMHYQWLPNRQNRNEELPNVGLKGDDIHSYHSCSQNTGQYQQRI 360

Query: 361 LVIDPSGRGKDETGYAVLYTLNGYIYLMEAGGFRDGYSDKTLELLAKKAKQWGVQTVVYE 420
LVIDPSGRGKDETGYAVL+TLNGYIYLMEAGGF DGYSDKTLE LAKKA +W VQTVV+E
Sbjct: 361 LVIDPSGRGKDETGYAVLFTLNGYIYLMEAGGFPDGYSDKTLESLAKKANEWKVQTVVFE 420

Query: 421 SNFGDGMFGKVFSPILLKHHNCAMEEIRARGMKEMRICDTLEPVMQTHRLVIRDEVIRAD 480
SNFGDGMFGKVFSP+LLKHH A+EEIRARGMKE+RICDTLEPV+ THRLVIRDEVIR D
Sbjct: 421 SNFGDGMFGKVFSPVLLKHHAAALEEIRARGMKELRICDTLEPVLSTHRLVIRDEVIRED 480

Query: 481 YQSARDVDGKHDVKYSLFYQMTRITREKGALAHDDRLDALALGIEYLRESMQLDSVKVEG 540
YQ+ARD DGKHDV+YSLFYQ+TR+ REKGA+AHDDRLDA LG+E+LR +M+LD+VKVE
Sbjct: 481 YQTARDADGKHDVRYSLFYQLTRMAREKGAVAHDDRLDAFRLGVEFLRSTMELDAVKVEA 540

Query: 541 EVLADFLEEHMMRPTVAATHIIEMSVGGVDVYSEDDEGYGTSFIEW 586
EVL FLEEHM P +A H++ V G+++Y EDD+ G FI W
Sbjct: 541 EVLEAFLEEHMEHPIHSAGHVVTAMVDGMELYWEDDDVNGDRFINW 586

>gi|9627482|ref|NP_042010.1| gene 19, DNA maturation protein [Bacteriophage T7]
gi|137615|sp|P03694|VDMB_BPT7 DNA MATURASE B (DNA PACKAGING PROTEIN B) (GP19)
gi|75972|pir||JVBPB7 DNA maturase B - phage T7
gi|579206|emb|CAA24440.1| (V01146) gene 19, DNA maturation protein [Bacteriophage T7]
Length = 586

Score = 1177 bits (3046), Expect = 0.0
Identities = 586/586 (100%), Positives = 586/586 (100%)

Query: 61 GIGKSFITCAFVVWSLWRDPQLKILIVSASKERADANSIFIKNIIDLLPFLSELKPRPGQ 120
GIGKSFITCAFVVWSLWRDPQLKILIVSASKERADANSIFIKNIIDLLPFLSELKPRPGQ
Sbjct: 61 GIGKSFITCAFVVWSLWRDPQLKILIVSASKERADANSIFIKNIIDLLPFLSELKPRPGQ 120

Query: 121 RDSVISFDVGPANPDHSPSVKSVGITGQLTGSRADIIIADDVEIPSNSATMGAREKLWTL 180
RDSVISFDVGPANPDHSPSVKSVGITGQLTGSRADIIIADDVEIPSNSATMGAREKLWTL
Sbjct: 121 RDSVISFDVGPANPDHSPSVKSVGITGQLTGSRADIIIADDVEIPSNSATMGAREKLWTL 180

Query: 181 VQEFAALLKPLPSSRVIYLGTPQTEMTLYKELEDNRGYTTIIWPALYPRTREENLYYSQR 240
VQEFAALLKPLPSSRVIYLGTPQTEMTLYKELEDNRGYTTIIWPALYPRTREENLYYSQR
Sbjct: 181 VQEFAALLKPLPSSRVIYLGTPQTEMTLYKELEDNRGYTTIIWPALYPRTREENLYYSQR 240

Query: 241 LAPMLRAEYDENPEALAGTPTDPVRFDRDDLRERELEYGKAGFTLQFMLNPNLSDAEKYP 300
LAPMLRAEYDENPEALAGTPTDPVRFDRDDLRERELEYGKAGFTLQFMLNPNLSDAEKYP
Sbjct: 241 LAPMLRAEYDENPEALAGTPTDPVRFDRDDLRERELEYGKAGFTLQFMLNPNLSDAEKYP 300

Query: 301 LRLRDAIVAALDLEKAPMHYQWLPNRQNIIEDLPNVGLKGDDLHTYHDCSNNSGQYQQKI 360
LRLRDAIVAALDLEKAPMHYQWLPNRQNIIEDLPNVGLKGDDLHTYHDCSNNSGQYQQKI
Sbjct: 301 LRLRDAIVAALDLEKAPMHYQWLPNRQNIIEDLPNVGLKGDDLHTYHDCSNNSGQYQQKI 360

Query: 361 LVIDPSGRGKDETGYAVLYTLNGYIYLMEAGGFRDGYSDKTLELLAKKAKQWGVQTVVYE 420
LVIDPSGRGKDETGYAVLYTLNGYIYLMEAGGFRDGYSDKTLELLAKKAKQWGVQTVVYE
Sbjct: 361 LVIDPSGRGKDETGYAVLYTLNGYIYLMEAGGFRDGYSDKTLELLAKKAKQWGVQTVVYE 420

Query: 421 SNFGDGMFGKVFSPILLKHHNCAMEEIRARGMKEMRICDTLEPVMQTHRLVIRDEVIRAD 480
SNFGDGMFGKVFSPILLKHHNCAMEEIRARGMKEMRICDTLEPVMQTHRLVIRDEVIRAD
Sbjct: 421 SNFGDGMFGKVFSPILLKHHNCAMEEIRARGMKEMRICDTLEPVMQTHRLVIRDEVIRAD 480

Query: 481 YQSARDVDGKHDVKYSLFYQMTRITREKGALAHDDRLDALALGIEYLRESMQLDSVKVEG 540
YQSARDVDGKHDVKYSLFYQMTRITREKGALAHDDRLDALALGIEYLRESMQLDSVKVEG
Sbjct: 481 YQSARDVDGKHDVKYSLFYQMTRITREKGALAHDDRLDALALGIEYLRESMQLDSVKVEG 540

Query: 541 EVLADFLEEHMMRPTVAATHIIEMSVGGVDVYSEDDEGYGTSFIEW 586
EVLADFLEEHMMRPTVAATHIIEMSVGGVDVYSEDDEGYGTSFIEW
Sbjct: 541 EVLADFLEEHMMRPTVAATHIIEMSVGGVDVYSEDDEGYGTSFIEW 586

>gi|9634048|ref|NP_052122.1| DNA packaging protein B [Bacteriophage phiYeO3-12]
gi|6599039|emb|CAB63643.1| (AJ251805) DNA packaging protein B [Bacteriophage phiYeO3-12]
Length = 587

Score = 1158 bits (2997), Expect = 0.0
Identities = 495/584 (84%), Positives = 536/584 (91%)

Query: 3   TQSNRNALVVAQLKGDFVAFLFVLWKALNLPVPTKCQIDMAKVLANGDNKKFILQAFRGI 62
           TQ+NRNAL++AQLKGDFVAFLFVLWKAL LP PTKCQIDMA+ LANGDNKKFILQAFRGI
Sbjct: 4   TQANRNALIIAQLKGDFVAFLFVLWKALALPPPTKCQIDMARCLANGDNKKFILQAFRGI 63

Query: 63 GKSFITCAFVVWSLWRDPQLKILIVSASKERADANSIFIKNIIDLLPFLSELKPRPGQRD 122
GKSFITCAFVVW+LWRDPQLKILIVSASKERADANSIFIKNIIDLLPFL+ELKPRPGQRD
Sbjct: 64 GKSFITCAFVVWTLWRDPQLKILIVSASKERADANSIFIKNIIDLLPFLAELKPRPGQRD 123

Query: 123 SVISFDVGPANPDHSPSVKSVGITGQLTGSRADIIIADDVEIPSNSATMGAREKLWTLVQ 182
SVISFDVGPA PDHSPSVKSVGITGQLTGSRADIIIADDVEIPSNSAT GAREKLWTLVQ
Sbjct: 124 SVISFDVGPAKPDHSPSVKSVGITGQLTGSRADIIIADDVEIPSNSATQGAREKLWTLVQ 183

Query: 183 EFAALLKPLPSSRVIYLGTPQTEMTLYKELEDNRGYTTIIWPALYPRTREENLYYSQRLA 242
EFAALLKPLP+SRVIYLGTPQTEMTLYKELEDNRGYTTIIWPALYPR+REE+LYY RLA
Sbjct: 184 EFAALLKPLPTSRVIYLGTPQTEMTLYKELEDNRGYTTIIWPALYPRSREEDLYYGDRLA 243

Query: 243 PMLRAEYDENPEALAGTPTDPVRFDRDDLRERELEYGKAGFTLQFMLNPNLSDAEKYPLR 302
PMLR E+++ E L G PTDPVRFD +DLRERELEYGKAGFTLQFMLNPNLSDAEKYPLR
Sbjct: 244 PMLREEFNDGFEMLQGQPTDPVRFDMEDLRERELEYGKAGFTLQFMLNPNLSDAEKYPLR 303

Query: 303 LRDAIVAALDLEKAPMHYQWLPNRQNIIEDLPNVGLKGDDLHTYHDCSNNSGQYQQKILV 362
LRDAIV LD EKAPMHYQWLPNRQN E+LPNVGLKGDD+H+YH CS N+GQYQQ+ILV
Sbjct: 304 LRDAIVCGLDFEKAPMHYQWLPNRQNRNEELPNVGLKGDDIHSYHSCSQNTGQYQQRILV 363

Query: 363 IDPSGRGKDETGYAVLYTLNGYIYLMEAGGFRDGYSDKTLELLAKKAKQWGVQTVVYESN 422
IDPSGRGKDETGYAVL+TLNGYIYLMEAGGFRDGYSDKTLE LAKKAKQW VQTVV+ESN
Sbjct: 364 IDPSGRGKDETGYAVLFTLNGYIYLMEAGGFRDGYSDKTLESLAKKAKQWKVQTVVFESN 423

Query: 423 FGDGMFGKVFSPILLKHHNCAMEEIRARGMKEMRICDTLEPVMQTHRLVIRDEVIRADYQ 482
FGDGMFGKVFSP+LLKHH AMEEIRARGMKE+RICDTLEPV+ THRLVIRDEVIR DYQ
Sbjct: 424 FGDGMFGKVFSPVLLKHHAAAMEEIRARGMKELRICDTLEPVLSTHRLVIRDEVIREDYQ 483

Query: 483 SARDVDGKHDVKYSLFYQMTRITREKGALAHDDRLDALALGIEYLRESMQLDSVKVEGEV 542
+ARD DGKHDV+YSLFYQ+TR+ REKGA+AHDDRLDALALG+E+LR +M+LD+VKVE EV
Sbjct: 484 TARDADGKHDVRYSLFYQLTRMAREKGAVAHDDRLDALALGVEFLRSTMELDAVKVEAEV 543

Query: 543 LADFLEEHMMRPTVAATHIIEMSVGGVDVYSEDDEGYGTSFIEW 586
L FLEEHM P +A H++ V G+++Y EDD+ FI+W
Sbjct: 544 LEAFLEEHMEHPIHSAGHVVTSMVDGMELYWEDDDVNSNRFIDW 587

>gi|7517637|pir||G70362 hypothetical protein aq_716 - Aquifex aeolicus
gi|2983298|gb|AAC06890.1| (AE000703) putative protein [Aquifex aeolicus]
Length = 464

Score = 35.3 bits (80), Expect = 1.4
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 19/129 (14%)

Query: 248 EYDENPEALAGTPTDPVRFDRDDLRERELEYGKAGF-TLQFMLNPNLSDAEKYPLRLRDA 306
E+ NPE G P +F + R + Y + GF + + +LS A + L+ +
Sbjct: 88 EFLHNPEKFKGQEVKPPKFRPKNKPHRTITYDQTGFKVVGTKIRLSLSKALRQWLKEKHG 147

Query: 307 IVAALDLEKAPMHYQWLPNRQNIIEDL-------PNVGLKGDDLHTYHDCSNNSGQY--Q 357
I + Y WL + E L P K +LH ++ N + Q
Sbjct: 148 I---------ELKYLWLDTGLELDERLIKNIQIVPKANAKEFELHIIYEKPQNGEKLLKQ 198

Query: 358 QKILVIDPS 366
K++V+DP+
Sbjct: 199 DKVMVLDPN 207

>gi|4588602|gb|AAD26153.1| (AF111857) insulin receptor precursor [Gallus gallus]
Length = 989

Score = 34.9 bits (79), Expect = 2.0
Identities = 13/45 (28%), Positives = 24/45 (52%)

Query: 226 LYPRTREENLYYSQRLAPMLRAEYDENPEALAGTPTDPVRFDRDD 270
L+P +E + +YS+ P+ EY+ + E + P DP + + D
Sbjct: 901 LHPSFQEVSFFYSEENKPLETEEYEMDFENMESIPLDPSSYTQRD 945

>gi|13470923|ref|NP_102492.1| probable acetyltransferase [Mesorhizobium loti]
gi|14021666|dbj|BAB48278.1| (AP002995) probable acetyltransferase [Mesorhizobium loti]
Length = 156

Score = 34.5 bits (78), Expect = 2.6
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 12/76 (15%)

Query: 382 NGYIYLMEAGGFRDGYSDKTLELLAKKAKQWGVQTVVYESNFGDGMFGKVFSPILLKHHN 441
NG ++L+E+GG G TLE A A +++ G GK F LLKH
Sbjct: 46 NGEVWLLESGGEPAGV--LTLERHADHA-------MIFSVAVSPGFQGKGFGIALLKH-- 94

Query: 442 CAMEEIRARGMKEMRI 457
A E+ R G+ E+R+
Sbjct: 95 -ADEQTRQWGLPEIRL 109

>gi|127807|sp|P26831|NAGH_CLOPE HYALURONOGLUCOSAMINIDASE PRECURSOR (HYALURONIDASE) (MU TOXIN)
gi|1075961|pir||S43904 hyaluronidase - Clostridium perfringens
gi|144861|gb|AAA23259.1| (M81878) hyaluronidase [Clostridium perfringens]
Length = 1042

Score = 34.5 bits (78), Expect = 2.8
Identities = 35/118 (29%), Positives = 52/118 (43%), Gaps = 18/118 (15%)

Query: 223 WPALYPRTREENLYYSQRLAPMLRAEYDENPEALAGTPTDPVRFDRDDLRERELEYGKAG 282
W LYP EE L ++LA M + AL +PVRFD ++ + +L KA
Sbjct: 232 WRDLYP---EEKLSEIKKLAQMGNETKNRYVYALHPFMNNPVRFDTEENYQNDLGVIKAK 288

Query: 283 FTLQFMLNPNLSDAEKYPLRLRDAIVAALDLEKAPMHYQ-------WLPNRQNIIEDL 333
FT Q + N D ++ + DA A + A M+ + WL +Q+ DL
Sbjct: 289 FT-QLLEN----DVRQFAILADDASAPA---QGASMYVKLLTDLTRWLEEQQSTYPDL 338

>gi|2984703|gb|AAC08007.1| (AF052427) unknown [Trypanosoma cruzi]
Length = 730

Score = 34.1 bits (77), Expect = 3.1
Identities = 20/66 (30%), Positives = 37/66 (55%), Gaps = 2/66 (3%)

Query: 244 MLRAEYDENPEALAGT--PTDPVRFDRDDLRERELEYGKAGFTLQFMLNPNLSDAEKYPL 301
M + E +EN L D R + ++L+ +++E G+A TL+ L ++++AEK
Sbjct: 535 MEKDELEENVIHLHYQMYKLDEARAELENLQRKKMELGRALETLEAQLKLDMAEAEKKDR 594

Query: 302 RLRDAI 307
++DAI
Sbjct: 595 DMKDAI 600

>gi|3135370|gb|AAC16490.1| (AF062496) insulin receptor a [Oncorhynchus mykiss]
Length = 1024

Score = 33.0 bits (74), Expect = 7.6
Identities = 18/54 (33%), Positives = 26/54 (47%), Gaps = 4/54 (7%)

Query: 226 LYPRTREENLYYSQRLAPMLRAEYDENPEALAGTPTDPV----RFDRDDLRERE 275
L+P +E + +YS+ P E+D + E + P DP R DRD L E
Sbjct: 934 LHPSFQEVSFFYSEENKPPETEEFDLDLENMESIPLDPSSYSQREDRDSLSRDE 987

>gi|11499739|ref|NP_070981.1| tRNA nucleotidyltransferase (cca) [Archaeoglobus fulgidus]
gi|3913198|sp|O28126|CCA_ARCFU TRNA NUCLEOTIDYLTRANSFERASE (TRNA ADENYLYLTRANSFERASE) (TRNA
           CCA-PYROPHOSPHORYLASE) (CCA-ADDING ENZYME)
gi|7446770|pir||D69519 tRNA nucleotidyltransferase (cca) homolog - Archaeoglobus fulgidus
gi|2648358|gb|AAB89084.1| (AE000955) tRNA nucleotidyltransferase (cca) [Archaeoglobus
           fulgidus]
          Length = 437

Score = 33.0 bits (74), Expect = 8.2
Identities = 23/76 (30%), Positives = 38/76 (49%), Gaps = 14/76 (18%)

Query: 263 PVRFDRDDLRERELEYGKA---GFTLQFMLNPNLSDAEK---------YPLRLRDAIVAA 310
P F +++LRER LE GKA + +++ +P + K Y L+ I +A
Sbjct: 67 PEEFSKEELRERGLEIGKAVLDSYEIRYAEHPYVHGVVKGVEVDVVPCYKLKEPKNIKSA 126

Query: 311 LDLEKAPMHYQWLPNR 326
+D + P H++WL R
Sbjct: 127 VD--RTPFHHKWLEGR 140

>gi|9294197|dbj|BAB02099.1| (AB026655) membrane related protein-like [Arabidopsis thaliana]
Length = 419

Score = 32.6 bits (73), Expect = 8.9
Identities = 14/49 (28%), Positives = 27/49 (54%)

Query: 147 GQLTGSRADIIIADDVEIPSNSATMGAREKLWTLVQEFAALLKPLPSSR 195
GQ+T ++ +D+ IP + A +G R +W V++ + L+ S+R
Sbjct: 285 GQMTACEVSLVHYEDMGIPKDVAKLGVRHGMWGAVKKLNSGLRAYQSAR 333

>gi|12833006|dbj|BAB22349.1| (AK002775) putative [Mus musculus]
gi|14715042|gb|AAH10683.1|AAH10683 (BC010683) associated with Prkcl1 [Mus musculus]
Length = 223

Score = 32.6 bits (73), Expect = 11
Identities = 17/56 (30%), Positives = 30/56 (53%)

Query: 112 SELKPRPGQRDSVISFDVGPANPDHSPSVKSVGITGQLTGSRADIIIADDVEIPSN 167
S ++P P S++S V P+ D + K+V T L G RA+ ++ + + PS+
Sbjct: 83 SSMQPGPVSNQSLLSESVAPSQVDSTSVDKAVSETEDLQGPRAEGLVPLECDPPSS 138

>gi|14625326|gb|AAK71409.1|AC006809_2 (AC006809) Hypothetical protein Y5H2A.2 [Caenorhabditis elegans]
Length = 391

Score = 32.2 bits (72), Expect = 11
Identities = 24/77 (31%), Positives = 34/77 (43%), Gaps = 8/77 (10%)

Query: 285 LQFMLNPNLSDAEKYPLRLRDAIVAALDLEKAPMHYQWLPNRQNIIEDLPNVGLKGDDLH 344
LQ M++ N +D E + ++A L A H+ N+ I E L L DDLH
Sbjct: 280 LQAMIDLNPTDIE------LNYMLAQLSFSYASKHFPGEGNKLEIAEHLQQ--LIADDLH 331

Query: 345 TYHDCSNNSGQYQQKIL 361
Y+ N Y +IL
Sbjct: 332 AYYTEELNMTSYSDRIL 348

>gi|629258|pir||S44975 lmrC protein - Streptomyces lincolnensis
gi|2127572|pir||S69834 lmrC protein - Streptomyces lincolnensis
gi|487718|emb|CAA55774.1| (X79146) lmrC [Streptomyces lincolnensis]
Length = 578

Score = 32.2 bits (72), Expect = 12
Identities = 21/64 (32%), Positives = 36/64 (55%), Gaps = 7/64 (10%)

Query: 128 DVGPANPDHSPS---VKSVGITGQLTGSRADIIIADDVEIPSNSATMGAREKLWTLVQEF 184
DV P S S V ++G+ QL R D++I D+ P+N+ + AR++L+ +V+E+
Sbjct: 130 DVSLDRPLRSLSGGQVLAIGLAAQLL-KRPDVLILDE---PTNNLDLAARQRLYQVVEEW 185

Query: 185 AALL 188
L
Sbjct: 186 KGAL 189

>gi|12667800|ref|NP_075361.1| associated with Prkcl1 [Mus musculus]
gi|11121500|emb|CAC14886.1| (AJ251508) AWP1 protein [Mus musculus]
Length = 223

Score = 31.8 bits (71), Expect = 15
Identities = 17/56 (30%), Positives = 30/56 (53%)

Query: 112 SELKPRPGQRDSVISFDVGPANPDHSPSVKSVGITGQLTGSRADIIIADDVEIPSN 167
S ++P P S++S V P+ D + K+V T L G RA+ ++ + + PS+
Sbjct: 83 SSMQPGPVSNQSLLSEPVAPSQVDSTSVDKAVSETEDLQGPRAEGLVPLECDPPSS 138

>gi|12844179|dbj|BAB26267.1| (AK009403) putative [Mus musculus]
Length = 176

Score = 31.8 bits (71), Expect = 16
Identities = 17/56 (30%), Positives = 30/56 (53%)

Query: 112 SELKPRPGQRDSVISFDVGPANPDHSPSVKSVGITGQLTGSRADIIIADDVEIPSN 167
S ++P P S++S V P+ D + K+V T L G RA+ ++ + + PS+
Sbjct: 83 SSMQPGPVSNQSLLSESVAPSQVDSTSVDKAVSETEDLQGPRAEGLVPLECDPPSS 138

>gi|4006905|emb|CAB16835.1| (Z99708) ATPase-like protein [Arabidopsis thaliana]
gi|7270606|emb|CAB80324.1| (AL161589) ATPase-like protein [Arabidopsis thaliana]
Length = 620

Score = 31.8 bits (71), Expect = 16
Identities = 14/67 (20%), Positives = 34/67 (49%)

Query: 474 DEVIRADYQSARDVDGKHDVKYSLFYQMTRITREKGALAHDDRLDALALGIEYLRESMQL 533
DE+ R Q+ + H+V+ + + I +EK +A ++++ A E R ++
Sbjct: 154 DELARKRQQTDHEAQRHHNVELVKMQEASSIRKEKAKIATEEQIQAQHRQTEKERAELER 213

Query: 534 DSVKVEG 540
++++V+
Sbjct: 214 ETIRVKA 220

>gi|4309734|gb|AAD15504.1| (AC006439) putative AAA-type ATPase [Arabidopsis thaliana]
Length = 703

Score = 31.0 bits (69), Expect = 25
Identities = 13/67 (19%), Positives = 34/67 (50%)

Query: 474 DEVIRADYQSARDVDGKHDVKYSLFYQMTRITREKGALAHDDRLDALALGIEYLRESMQL 533
DE+ R Q+ + +H+ + + + I +EK +A ++++ A E R ++
Sbjct: 223 DELARKRMQTDNEAQRRHNAELVSMQEASSIRKEKARIATEEQIQAQQRETEKERAELER 282

Query: 534 DSVKVEG 540
++++V+
Sbjct: 283 ETIRVKA 289

>gi|7464615|pir||D71970 hypothetical protein jhp0137 - Helicobacter pylori (strain J99)
gi|4154647|gb|AAD05716.1| (AE001452) putative [Helicobacter pylori J99]
Length = 197

Score = 31.0 bits (69), Expect = 26
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 11/96 (11%)

Query: 20 VAFLFVLWKALNLPVPTKCQIDMAK------VLANGDNKKFILQAFRGIGKSFITCAFVV 73
VAF+ + K L L + IDM LAN ++ + F K FVV
Sbjct: 36 VAFIEGVSKELYLKTGVRFAIDMTDFEKNPIALANKKERQSYQEGFLKQLKP----PFVV 91

Query: 74 WSLWRDPQLKILIVSASKERADANSIFIKNIIDLLP 109
+ + D Q KI +V+ K+ D + IF + I LLP
Sbjct: 92 FFFYHDAQ-KIELVANPKDLLDTDKIFFEKIAPLLP 126

>gi|7485064|pir||C71407 hypothetical protein - Arabidopsis thaliana
gi|2244806|emb|CAB10229.1| (Z97336) hypothetical protein [Arabidopsis thaliana]
gi|7268156|emb|CAB78492.1| (AL161539) hypothetical protein [Arabidopsis thaliana]
Length = 420

Score = 31.0 bits (69), Expect = 29
Identities = 14/49 (28%), Positives = 26/49 (52%)

Query: 147 GQLTGSRADIIIADDVEIPSNSATMGAREKLWTLVQEFAALLKPLPSSR 195
GQ T ++ +D+ IP + A +G R +W V++ + L+ S+R
Sbjct: 288 GQQTACEVSLVHYEDMGIPKDVAKLGVRHGMWGAVKKLNSGLRAYQSAR 336

>gi|13471767|ref|NP_103334.1| hypothetical protein [Mesorhizobium loti]
gi|14022511|dbj|BAB49120.1| (AP002998) hypothetical protein [Mesorhizobium loti]
Length = 699

Score = 31.0 bits (69), Expect = 31
Identities = 20/65 (30%), Positives = 28/65 (42%), Gaps = 1/65 (1%)

Query: 503 RITREKGALAHDDRLDALALGIEYLRESMQLDSVKVEGEVLADFLEEHMMRPTVAATHII 562
R RE+ D A EYLR +D++K++G + E R V+A I
Sbjct: 580 RKARERRCKVSLDDFGAGMSSFEYLRR-FPVDAIKIDGSFIEHMAESRFDREIVSAISGI 638

Query: 563 EMSVG 567
SVG
Sbjct: 639 ARSVG 643

>gi|10720364|sp|Q58863|YE68_METJA HYPOTHETICAL PROTEIN MJ1468
gi|2128879|pir||C64483 hypothetical protein MJ1468 - Methanococcus jannaschii
gi|2826412|gb|AAB99478.1| (U67588) surface antigen [Methanococcus jannaschii]
Length = 1009

Score = 31.0 bits (69), Expect = 32
Identities = 21/56 (37%), Positives = 26/56 (45%), Gaps = 7/56 (12%)

Query: 344 HTYHDCSNNSGQYQQKILVIDPSGR---GKDETGYAVLYTLNGYIYLMEAGGFRDG 396
HTY SG Y ++LV+D SGR G + G V GYIY + DG
Sbjct: 228 HTY----TKSGLYYPRVLVVDDSGRVMVGYLDEGIEVKRARGGYIYWVTGPSHYDG 279

>gi|13376095|ref|NP_079034.1| hypothetical protein FLJ23384 [Homo sapiens]
gi|10440052|dbj|BAB15633.1| (AK027037) unnamed protein product [Homo sapiens]
Length = 352

Score = 30.7 bits (68), Expect = 33
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 107 LLPFLSELKPRPGQRDSVISFDVGPANPDHSPSVKSVGITGQLTGSRADIII 158
L+P + E++ + G + ISFD+ +P ++P + I G LT S+A II
Sbjct: 255 LVPLMGEVRQQMGGKPIYISFDIDALDPAYAPGTGTPEIAG-LTPSQALEII 305

>gi|1170375|sp|P12076|HS71_LEIMA HEAT SHOCK 70-RELATED PROTEIN 1, MITOCHONDRIAL PRECURSOR
gi|311290|emb|CAA45498.1| (X64137) heat shock protein 70-related protein [Leishmania major]
Length = 634

Score = 30.7 bits (68), Expect = 34
Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 29/110 (26%)

Query: 133 NPDHSPSVKSVGITGQLTGSRADIIIAD------------DV---EIPSNSATMGAREKL 177
NPD + ++ + + G L G +D+I+ D DV IP N+ R +
Sbjct: 385 NPDEAVALGAATLGGVLRGKASDLILVDVTPLSLGTSVVGDVFVPIIPKNTTIPCMRSHI 444

Query: 178 WTLVQE------FAALLKPLPSSRVIYLGTPQTEMTLYKELEDNRGYTTI 221
+T V + F + P P G PQ E+T +++ N+G I
Sbjct: 445 FTTVDDGQTAIKFKVFIPPAPR------GVPQVEVTF--DIDANQGEREI 486

>gi|10173597|dbj|BAB04701.1| (AP001510) BH0982~unknown conserved protein in others [Bacillus
halodurans]
Length = 461

Score = 30.7 bits (68), Expect = 35
Identities = 28/108 (25%), Positives = 40/108 (36%), Gaps = 20/108 (18%)

Query: 184 FAALLKPLPSSRVIYLGTPQTEMTLYKELEDNRGYTTIIWPALYPRTREENLYYSQRLAP 243
F+ L L S +YL PQ E +LY+EL Y + +E L
Sbjct: 36 FSPFLIILAISGGVYLFKPQIEASLYQEL-------------YYVQETKEATLTPSALVA 82

Query: 244 MLRAEYDENPEALAGTPTDPVRFDRDDLRERELEYGKAGFTLQFMLNP 291
+ + E +P VRF D R E+ K G + +NP
Sbjct: 83 RAKEAFPE-------SPVSSVRFYDDPQRTTEISMMKDGERISVYVNP 123

>gi|13477245|gb|AAH05090.1|AAH05090 (BC005090) hypothetical protein FLJ23384 [Homo sapiens]
Length = 352

Score = 30.7 bits (68), Expect = 35
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 107 LLPFLSELKPRPGQRDSVISFDVGPANPDHSPSVKSVGITGQLTGSRADIII 158
L+P + E++ + G + ISFD+ +P ++P + I G LT S+A II
Sbjct: 255 LVPLMGEVRQQMGGKPIYISFDIDALDPAYAPGTGTPEIAG-LTPSQALEII 305

>gi|1568613|gb|AAB09032.1| (U51329) nitrite reductase [Aspergillus fumigatus]
Length = 1110

Score = 30.7 bits (68), Expect = 35
Identities = 13/26 (50%), Positives = 18/26 (69%)

Query: 118 PGQRDSVISFDVGPANPDHSPSVKSV 143
PGQR S++ VG A+ D PSVK++
Sbjct: 406 PGQRPSIVDGSVGNADGDKEPSVKAL 431

>gi|13638702|ref|XP_015971.1| hypothetical protein FLJ23384 [Homo sapiens]
Length = 352

Score = 30.7 bits (68), Expect = 35
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 107 LLPFLSELKPRPGQRDSVISFDVGPANPDHSPSVKSVGITGQLTGSRADIII 158
L+P + E++ + G + ISFD+ +P ++P + I G LT S+A II
Sbjct: 255 LVPLMGEVRQQMGGKPIYISFDIDALDPAYAPGTGTPEIAG-LTPSQALEII 305

>gi|14041732|emb|CAC38403.1| (AJ308438) XptC1 protein [Xenorhabdus nematophila]
Length = 1401

Score = 30.3 bits (67), Expect = 46
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 3/68 (4%)

Query: 323 LPNRQNIIEDLPNVGLKGDDLHTYHDCSNNSGQYQQKILVID---PSGRGKDETGYAVLY 379
+P+ Q E L G L H + + +KI+ ++ P R ++ET + VL+
Sbjct: 107 VPDSQGQPEQRTATSLLGTVLTQPHTVTRYQSRVAEKIVRLEHWQPQQRREEETSFWVLF 166

Query: 380 TLNGYIYL 387
T +G ++L
Sbjct: 167 TADGLVHL 174

>gi|2493025|sp|P72247|ATPB_RHOCA ATP SYNTHASE BETA CHAIN
gi|1524324|emb|CAA67910.1| (X99599) FoF1 ATP synthase [Rhodobacter capsulatus]
Length = 472

Score = 30.3 bits (67), Expect = 46
Identities = 14/43 (32%), Positives = 23/43 (52%)

Query: 447 IRARGMKEMRICDTLEPVMQTHRLVIRDEVIRADYQSARDVDG 489
+ +R + E+ I ++P+ T R++ V YQ ARDV G
Sbjct: 329 VLSRAISELGIYPAVDPLDSTSRILDPQVVGEEHYQVARDVQG 371

>gi|7298451|gb|AAF53672.1| (AE003659) CG10275 gene product [Drosophila melanogaster]
Length = 2225

Score = 30.3 bits (67), Expect = 55
Identities = 19/61 (31%), Positives = 36/61 (58%), Gaps = 2/61 (3%)

Query: 262 DPVRFDRDDLRERELEYGKAGFTLQFMLNPNLSDAEKYPLRLR-DAIVAALDLEKAPMHY 320
D + + +D + ++ + KAG +QFM N ++SD + + + LR +A +A L L+ A Y
Sbjct: 125 DFILLEIED-QHLKVTFNKAGSLVQFMTNEHISDGKWHRVFLRYNAAIAELSLDDATSGY 183

Query: 321 Q 321
+
Sbjct: 184 R 184

>gi|4503575|ref|NP_001968.1| glutamyl aminopeptidase (aminopeptidase A); gp160 [Homo sapiens]
gi|584751|sp|Q07075|AMPE_HUMAN GLUTAMYL AMINOPEPTIDASE (EAP) (AMINOPEPTIDASE A) (APA)
(DIFFERENTIATION ANTIGEN GP160)
gi|291854|gb|AAA35522.1| (L14721) aminopeptidase A [Homo sapiens]
Length = 957

Score = 29.9 bits (66), Expect = 59
Identities = 24/82 (29%), Positives = 33/82 (39%), Gaps = 4/82 (4%)

Query: 259 TPTDPVRFDRDDLRERELEYGK-AGFTLQFMLNPNLSDAEKYPLRLRDAIVAALDLE--- 314
+P+ P D+D E E G+ F L +NP D PL D + +
Sbjct: 66 SPSGPPAQDQDICPASEDESGQWKNFRLPDFVNPVHYDLHVKPLLEEDTYTGTVSISINL 125

Query: 315 KAPMHYQWLPNRQNIIEDLPNV 336
AP Y WL R+ I LP +
Sbjct: 126 SAPTRYLWLHLRETRITRLPEL 147

>gi|1082404|pir||A47531 glutamyl aminopeptidase (EC 3.4.11.7) - human
gi|347893|gb|AAA16876.1| (L12468) aminopeptidase A [Homo sapiens]
Length = 957

Score = 29.9 bits (66), Expect = 59
Identities = 24/82 (29%), Positives = 33/82 (39%), Gaps = 4/82 (4%)

Query: 259 TPTDPVRFDRDDLRERELEYGK-AGFTLQFMLNPNLSDAEKYPLRLRDAIVAALDLE--- 314
+P+ P D+D E E G+ F L +NP D PL D + +
Sbjct: 66 SPSGPPAQDQDICPASEDESGQWKNFRLPDFVNPVHYDLHVKPLLEEDTYTGTVSISINL 125

Query: 315 KAPMHYQWLPNRQNIIEDLPNV 336
AP Y WL R+ I LP +
Sbjct: 126 SAPTRYLWLHLRETRITRLPEL 147

>gi|6320376|ref|NP_010456.1| heat shock protein similar to HSP26, involved in cytoskeleton
assembly; Hsp42p [Saccharomyces cerevisiae]
gi|2495335|sp|Q12329|HS42_YEAST HEAT SHOCK PROTEIN 42 (42 KD HEAT SHOCK PROTEIN)
gi|1077219|pir||S49767 heat shock protein HSP42 - yeast (Saccharomyces cerevisiae)
gi|1163915|gb|AAC49256.1| (U41401) Hsp42p [Saccharomyces cerevisiae]
gi|1289286|emb|CAA86676.1| (Z46727) unknown [Saccharomyces cerevisiae]
Length = 375

Score = 29.9 bits (66), Expect = 61
Identities = 34/139 (24%), Positives = 50/139 (35%), Gaps = 14/139 (10%)

Query: 163 EIPSNSATMGAREKLWTLVQEFAALLKPLPSSRVIYLGTPQTEMTLYKELE----DNRGY 218
E P N +R L FA L P P + + P+T M L E D
Sbjct: 195 EKPLNQLEESSRPPLAKKSSSFAHLQAPSPIPDPLQVSKPETRMDLPFSPEVNVYDTEDT 254

Query: 219 TTIIWPALYPRTREENLYYSQRLAPMLRAEYDENPEALAGTPTDPVRFDRDDLRERELEY 278
++ +R ++ Y ML + G D V D L+ EL+Y
Sbjct: 255 YVVVLALPGANSRAFHIDYHPSSHEML----------IKGKIEDRVGIDEKFLKITELKY 304

Query: 279 GKAGFTLQFMLNPNLSDAE 297
G T++F + P + D E
Sbjct: 305 GAFERTVKFPVLPRIKDEE 323

>gi|11288959|pir||T49373 hypothetical protein B1D1.270 [imported] - Neurospora crassa
gi|7800817|emb|CAB91276.1| (AL355927) hypothetical protein [Neurospora crassa]
Length = 463

Score = 29.9 bits (66), Expect = 61
Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 151 GSRADIIIADDVEIPSNSATMGAREKLW 178
G + ++IA D IPSNS ARE+ W
Sbjct: 241 GGKRPLVIAIDFIIPSNSHLASARERSW 268

>gi|8515860|gb|AAF76212.1|AF272053_2 (AF272053) HrpX [Erwinia herbicola pv. gypsophilae]
Length = 486

Score = 29.9 bits (66), Expect = 67
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 8/68 (11%)

Query: 423 FGDGMFGKVFSPILLKHHNCAMEEIRARGMKEMRICDTLEPVMQTHRLVIRDEVIRADYQ 482
FG + G+ +P L+H + ++EE R R ++E+ L V RL+ +EVI
Sbjct: 159 FGTDLKGQYANPAALRHLHLSVEEFRGRTLREL--LGDLPSVTHIERLI--NEVI----S 210

Query: 483 SARDVDGK 490
+ + DG+
Sbjct: 211 TPIEADGE 218

>gi|7433488|pir||H64670 ulcer associated adenine specific DNA methyltransferase -
           Helicobacter pylori (strain 26695)
gi|2314368|gb|AAD08252.1| (AE000626) ulcer associated adenine specific DNA methyltransferase
           [Helicobacter pylori 26695]
          Length = 329

Score = 29.9 bits (66), Expect = 68
Identities = 11/36 (30%), Positives = 23/36 (63%)

Query: 321 QWLPNRQNIIEDLPNVGLKGDDLHTYHDCSNNSGQY 356
Q +PN++ +I ++ +V LK +++Y+ +S QY
Sbjct: 73 QEIPNQEELINEINSVALKKGFIYSYYSLGGSSRQY 108

>gi|1705469|sp|P53554|BIOI_BACSU BIOTIN BIOSYNTHESIS; CYTOCHROME P450-LIKE ENZYME
gi|7427582|pir||G69594 cytochrome P450 bioI - Bacillus subtilis
gi|1277030|gb|AAB17462.1| (U51868) cytochrome P450-like enzyme [Bacillus subtilis]
gi|2293188|gb|AAC00266.1| (AF008220) cytochrome P450 enzyme [Bacillus subtilis]
gi|2635503|emb|CAB14997.1| (Z99119) cytochrome P450-like enzyme [Bacillus subtilis]
Length = 395

Score = 29.9 bits (66), Expect = 72
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 10/61 (16%)

Query: 182 QEFAALLK--------PLPSSRVIY--LGTPQTEMTLYKELEDNRGYTTIIWPALYPRTR 231
+E AA+LK PLP S Y L Q +M L++ D+R T+ A PRT
Sbjct: 46 EETAAILKDARFKVRTPLPESSTKYQDLSHVQNQMMLFQNQPDHRRLRTLASGAFTPRTT 105

Query: 232 E 232
E
Sbjct: 106 E 106

>gi|7493969|pir||T03834 nuclear distribution protein RO11 - Neurospora crassa
gi|2353163|gb|AAB69381.1| (AF015560) RO11 [Neurospora crassa]
Length = 697

Score = 29.5 bits (65), Expect = 73
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 8/92 (8%)

Query: 467 THRLVIRD-EVIRADYQ-SARDVDGK---HDVKYSLFYQMTRITREKGALAHDDRLDALA 521
T +L +RD EV D++ AR+ + KY++ + + E+ + +R
Sbjct: 107 TLQLKLRDIEVANDDFERQARNTSSSLEDLESKYNVAIERAVMMEEEIKIGEQERE---R 163

Query: 522 LGIEYLRESMQLDSVKVEGEVLADFLEEHMMR 553
L +E R +L +K+E E+L L +H R
Sbjct: 164 LRVEAQRLREELSDLKIEAEILQSKLRKHQAR 195

>gi|7302967|gb|AAF58038.1| (AE003807) CG15701 gene product [Drosophila melanogaster]
Length = 1051

Score = 29.5 bits (65), Expect = 76
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 319 HYQWLPNRQNIIEDLPNVGLKGDDLHTYHDCSNNSGQYQQKILVIDPSGRGKDET 373
HY + +R+ +E+L + LK D+ C +Q +L++D +G+ + T
Sbjct: 999 HYDFYRDRELPVEELMDTRLKVTDIAGARSCGQ-----EQVLLILDSTGKVQSRT 1048

>gi|13277237|emb|CAC34379.1| (AJ310086) adenylyltransferase [Corynebacterium glutamicum]
Length = 1045

Score = 29.5 bits (65), Expect = 84
Identities = 28/107 (26%), Positives = 41/107 (38%), Gaps = 32/107 (29%)

Query: 176 KLWTLVQEFAALLKPLPSSRVIYLGTPQTEMTLYKELEDNRGYTTIIWPALYPRTREENL 235
K W EF ALLK P + I LG + Y + P ++ ++ E+
Sbjct: 327 KRWAETWEFQALLKARPMTGDINLG---------------QSYVDALSPLIWTASQRES- 370

Query: 236 YYSQRLAPMLRAEYDENPEALAGTPTDPVRFDRDDLRERELEYGKAG 282
+ + M R D PE DLR+REL+ G+ G
Sbjct: 371 -FVTDVQAMRRRVLDNVPE---------------DLRDRELKLGRGG 401

>gi|3913820|sp|P95506|HEMN_PASHA OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE
(COPROPORPHYRINOGENASE) (COPROGEN OXIDASE)
gi|1685093|gb|AAC44662.1| (U46781) HEMN [Mannheimia haemolytica]
Length = 146

Score = 29.5 bits (65), Expect = 84
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 197 IYLGTPQTEMTLYKELEDNRGYTTIIWPALYPRTREENLYYSQRLAPMLRAEYDENPEAL 256
IYL + E+ L NR T I W P +E+ S RL MLRA +D + +A
Sbjct: 82 IYLDYLEREIKTRAPLFQNRLVTQIHWGRGTPTYLDED--QSARLMQMLRANFDVSDDAE 139

Query: 257 AGTPTDP 263
DP
Sbjct: 140 ISIEMDP 146

>gi|125943|sp|P22733|LACY_LACDE LACTOSE PERMEASE (LACTOSE-PROTON SYMPORT) (LACTOSE TRANSPORT
PROTEIN)
gi|98665|pir||A38538 lactose permease - Lactobacillus delbrueckii subsp. bulgaricus
gi|149565|gb|AAA25243.1| (M55068) lactose permease [Lactobacillus delbrueckii]
Length = 627

Score = 29.5 bits (65), Expect = 87
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 9/40 (22%)

Query: 371 DETGYAVLYTLNGYIYLMEAGGFRDGYSDKTLELLAKKAK 410
D GY++LYT+N ++ L+ A F LAKK
Sbjct: 275 DARGYSLLYTINTFVGLISASFFP---------SLAKKFN 305

>gi|3831467|gb|AAC69949.1| (AC005700) putative beta-amylase [Arabidopsis thaliana]
Length = 505

Score = 29.5 bits (65), Expect = 90
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 315 KAPMHYQWLPNRQNIIEDLPNVGLKGDDLHTYHDCSNNSG 354
K P YQW R N+ + + GLK + ++H C N G
Sbjct: 56 KGPKQYQWSAYR-NLFAIVQSFGLKLQAIMSFHRCGGNIG 94

>gi|11360483|pir||G81702 adherence factor TC0437 [imported] - Chlamydia muridarum (strain
Nigg)
gi|7190480|gb|AAF39291.1| (AE002311) adherence factor [Chlamydia muridarum]
Length = 3255

Score = 29.5 bits (65), Expect = 91
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 7/64 (10%)

Query: 507 EKGALAHDDRLDALALGIEYLRESMQLDSVKVEGEVLADFLEEHMMRPTVAATHIIEMSV 566
E G H R+D E+ E+ LD +K+ G+VL DFL +H++ + ++ +
Sbjct: 1692 EIGGSIHHRRID------EFTSET-DLDEMKLNGDVLTDFLTKHVLDSETVSLILVLLET 1744

Query: 567 GGVD 570
G++
Sbjct: 1745 RGLE 1748

>gi|6685430|sp|O84535|FMT_CHLTR METHIONYL-TRNA FORMYLTRANSFERASE
gi|7449024|pir||A71502 probable methionyl tRNA formyltransferase - Chlamydia trachomatis
(serotype D, strain UW3/Cx)
gi|3328968|gb|AAC68132.1| (AE001324) Methionyl tRNA Formyltransferase [Chlamydia trachomatis]
Length = 316

Score = 29.5 bits (65), Expect = 93
Identities = 23/71 (32%), Positives = 32/71 (44%), Gaps = 6/71 (8%)

Query: 195 RVIYLGTPQTEMTLYKELEDNRGYTT-IIWPALYPRTREENLYYSQRLAPMLRAEYDENP 253
RV+YLGTPQ T+ K L D + ++ A P+ R L S P+ + +N
Sbjct: 4 RVVYLGTPQFAATVLKTLLDAHTHIVGVVTRADKPQKRSSKLISS----PVKQLALSKNI 59

Query: 254 EALAG-TPTDP 263
L TDP
Sbjct: 60 PLLQPIKTTDP 70

>gi|11354424|pir||E82133 ATP-dependent helicase, DinG family VC1990 [imported] - Vibrio
cholerae (group O1 strain N16961)
gi|9656531|gb|AAF95138.1| (AE004273) ATP-dependent helicase, DinG family [Vibrio cholerae]
Length = 646

Score = 29.5 bits (65), Expect = 93
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 7/59 (11%)

Query: 35 PTKCQIDMAKVLAN--GDNKKFILQAFRGIGKSFITCAFVVWSLWRDPQLKILIVSASK 91
P + Q+DMAK +A+ + + +++A G GK+F A++V +L K++I + SK
Sbjct: 21 PRQAQVDMAKAVASAIANQSQLVVEAGTGTGKTF---AYLVPALLSGK--KVIISTGSK 74

>gi|2498194|sp|Q27957|BS25_BOVIN 25 KD BRAIN-SPECIFIC PROTEIN (P25)
gi|1083057|pir||S53292 novel brain-specific protein - bovine
gi|2136725|pir||S58769 brain-specific protein, 25K - bovine
gi|747706|emb|CAA59741.1| (X85738) novel brain-specific protein [Bos taurus]
Length = 218

Score = 29.5 bits (65), Expect = 93
Identities = 14/38 (36%), Positives = 21/38 (54%), Gaps = 3/38 (7%)

Query: 348 DCSNNSGQYQQKILVIDPSGRGKDETGYAVLYTLNGYI 385
D S +G ++++ DPSGRGK G L +GY+
Sbjct: 167 DTSKFTGSHKER---FDPSGRGKGRAGRVDLVDESGYV 201

Database: nr
    Posted date: Jul 15, 2001 9:31 PM
Number of letters in database: 223,682,623
Number of sequences in database: 709,632

Lambda     K      H
   0.320    0.150    0.482

Gapped
Lambda K H
0.267 0.0458 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 330,739,673
Number of Sequences: 709632
Number of extensions: 17363425
Number of successful extensions: 35992
Number of sequences better than 100.0: 76
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 35945
Number of HSP's gapped (non-prelim): 109
length of query: 586
length of database: 223,682,623
effective HSP length: 124
effective length of query: 462
effective length of database: 135,688,255
effective search space: 62687973810
effective search space used: 62687973810
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.5 bits)